Pairwise Alignments

Query, 453 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmE from Variovorax sp. SCN45

 Score =  451 bits (1160), Expect = e-131
 Identities = 250/470 (53%), Positives = 316/470 (67%), Gaps = 24/470 (5%)

Query: 2   TTDTIVAQATAPGRGGVGIIRVSGPLAAHVAQTVTGRTLRPRYAEYLPFTDEDGQQLDQG 61
           TTD IVA ATA GRG VGI+RVSG   A + + + GR L+PR A YLPF D  G+ +D G
Sbjct: 5   TTDPIVAIATASGRGAVGIVRVSGARLAPLIEAICGRVLKPREATYLPFRDAGGEPVDHG 64

Query: 62  IALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQ-------------IKGVRPARPG 108
           +A+ FP+P+SFTGEDVLELQ HGG VV+ +L+ R L+             + G+R A PG
Sbjct: 65  LAIHFPSPNSFTGEDVLELQAHGGAVVLQLLLARCLEAAAEPDPVTGRPRLPGLRVAEPG 124

Query: 109 EFSERAFLNDKMDLTQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHLRIY 168
           EFS+RAFLN K+DL QAEAIADLIDAS+E AA+SA +SL G FS+ IHTL ++LIHLR+ 
Sbjct: 125 EFSQRAFLNGKIDLAQAEAIADLIDASTEAAARSAGRSLSGAFSREIHTLRDALIHLRML 184

Query: 169 VEAAIDFPEEEIDFLADGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNAGK 228
           VEA +DFPEEEIDFL     +  L  +   LAAV++ A QGA++REG+KVVIAG+PNAGK
Sbjct: 185 VEATLDFPEEEIDFLQKADAAGQLAKLQSQLAAVQQRARQGALLREGIKVVIAGQPNAGK 244

Query: 229 SSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIERA 288
           SSLLNAL+G E AIV+ +AGTTRDV+ + I I G+PLH+ DTAGLR++SD VE+IG+ RA
Sbjct: 245 SSLLNALAGAELAIVSAVAGTTRDVVSQTIQIHGVPLHVADTAGLRESSDEVEQIGVARA 304

Query: 289 WEEIRQADRVLFMVDGTTTEATD----PQDIWPDFVDKLPENIGITVIRNKADQTGEPLG 344
           W +I  AD VLF+ D T     D      +I      KLP ++ +  + NK D       
Sbjct: 305 WGQIESADAVLFLHDLTRAALPDYAAADAEILAGLRRKLPASVPVLDVWNKQDAAPS--- 361

Query: 345 ICHVNQPTLIRLSAKTGQGVDALRQHLKECMGFSGNQEGGFMARRRHLDALERAAEHLAI 404
                    I LSAKTG G++ALR+ L    G+    EG ++AR RH+ AL +   HLA+
Sbjct: 362 ---TEPAEGIALSAKTGLGIEALREQLLAMAGWQAVPEGVYLARARHVQALAQVEAHLAL 418

Query: 405 GQQQLEGY-MAGEILAEELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK 453
               L       ++LAEELR+AQ  LNEITGEF +DDLLG IFS FCIGK
Sbjct: 419 AASHLAAQAQLLDLLAEELRLAQNALNEITGEFGADDLLGVIFSRFCIGK 468