Pairwise Alignments

Query, 453 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., tRNA-5-carboxymethylaminomethyl-2- thiouridine(34) synthesis protein MnmE from Sphingobium sp. HT1-2

 Score =  247 bits (630), Expect = 6e-70
 Identities = 163/455 (35%), Positives = 251/455 (55%), Gaps = 32/455 (7%)

Query: 3   TDTIVAQATAPGRGGVGIIRVSGPLAAHVAQTVTGRTLRPRYAEYLPFTD-EDGQQLDQG 61
           ++TI A ++     G+G++RVSGP+A    Q + GR   PR A     +D  DG  LD+ 
Sbjct: 2   SETIFALSSGAPPAGIGVVRVSGPMAGAALQALAGRLPTPRMASLALLSDPRDGTPLDRA 61

Query: 62  IALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIKGVRPARPGEFSERAFLNDKMD 121
           + L+ P P + TGED+ EL  HGG  V+  +   +  +  +R A  GEF+ RAF + +MD
Sbjct: 62  LLLWLPGPRTVTGEDMAELHCHGGRAVIAAVEAALGAMPELRRATAGEFTRRAFAHGRMD 121

Query: 122 LTQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHLRIYVEAAIDFPEEE-- 179
           L + E +ADL+ A ++Q  ++AL  ++G FS+RI      L+ L    EAA+DF +E+  
Sbjct: 122 LNEVEGLADLLAAETQQQRRAALAMMEGHFSQRIDGWRMRLLDLSAMAEAALDFSDEDDV 181

Query: 180 IDFLADGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNAGKSSLLNALSGKE 239
            D   + ++   +  + D++ A+   A     +R+G++VV+AG PNAGKS+LLN L G+E
Sbjct: 182 PDADIEARIGQGVMALADDVGAL-LSAPSAERLRDGIRVVLAGPPNAGKSTLLNRLVGRE 240

Query: 240 SAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLR-DASDAVEKIGIERAWEEIRQADRV 298
           +AIV+DIAGTTRD +     I G      DTAGLR +  DA+E IGI+RA   +  AD +
Sbjct: 241 AAIVSDIAGTTRDRIEVPAAIGGTAFLFTDTAGLREETGDAIEAIGIDRARAALEAADII 300

Query: 299 LFMVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEPLGICHVNQPTLIRLSA 358
           L++  G   EA  P++          + + I    + A    E LG         +RLSA
Sbjct: 301 LWL--GEPDEA--PRE----------DALLIAAQSDVALFGPERLG---------LRLSA 337

Query: 359 KTGQGVDALRQHLKECMGFSGNQEGGFMARRRHLDALERAAEHLAIGQQQLEGYMAGEIL 418
           +TG+G+DAL   L +        EG +    R  D +    +HL       +      +L
Sbjct: 338 RTGEGMDALVAMLLDRAATLLPGEGDYALHARQRDGVRALHDHLLAAGAARDLL----VL 393

Query: 419 AEELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK 453
           AEELR+ ++ ++ +TG+  ++D+L R+FS FCIGK
Sbjct: 394 AEELRLGRRMIDALTGQAGTEDMLDRLFSGFCIGK 428