Pairwise Alignments

Query, 453 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., GTPase Der from Pseudomonas putida KT2440

 Score = 72.0 bits (175), Expect = 4e-17
 Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 6/122 (4%)

Query: 185 DGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNAGKSSLLNALSGKESAIVT 244
           D +  A  Q + +   AVR     G   ++G+K+ I GRPN GKS+L+N + G+E  +V 
Sbjct: 165 DAEEEALEQDVAEGEEAVRIP---GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVY 221

Query: 245 DIAGTTRDVLREHIHIDGMPLHIIDTAGLRDAS---DAVEKIGIERAWEEIRQADRVLFM 301
           D  GTTRD +      DG     IDTAG+R      + VEK  + +  + I+ A+ V+F+
Sbjct: 222 DEPGTTRDSIYIPFERDGEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFV 281

Query: 302 VD 303
           +D
Sbjct: 282 MD 283



 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 6/155 (3%)

Query: 218 VVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDAS 277
           + + GRPN GKS++ N L+    AIV D++G TRD         G    +IDT G+    
Sbjct: 5   IALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGITGDE 64

Query: 278 DAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNKAD 337
             +++   E++   I +AD VLF+VD         Q I  + + K   N    ++ NK D
Sbjct: 65  VGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMI-AEHLRK--RNKAAILVANKID 121

Query: 338 QTGEPLG---ICHVNQPTLIRLSAKTGQGVDALRQ 369
                +       +     I ++   G+G++AL +
Sbjct: 122 NIDPDVARAEFSPMGMGNAIPVAGSQGRGINALME 156