Pairwise Alignments

Query, 453 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., tRNA modification GTPase TrmE from Bacteroides ovatus ATCC 8483

 Score =  253 bits (646), Expect = 9e-72
 Identities = 166/476 (34%), Positives = 267/476 (56%), Gaps = 34/476 (7%)

Query: 1   MTTDTIVAQATAPGRGGVGIIRVSGPLAAHVAQTVTGRTLRPRYA-----EYLPFTDEDG 55
           M  DTI A ATA G G +G IRVSGP A     ++TG   +P  A     E  P+T   G
Sbjct: 1   MIQDTICAIATAQG-GAIGNIRVSGPEAI----SITGSIFKPAKAGKLLSEQKPYTLTFG 55

Query: 56  ------QQLDQGIALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIKGVRPARPGE 109
                 + +D+ +   F  PHS+TGED  E+  HG   ++  +++ +++  G R A+PGE
Sbjct: 56  RIYDGDEMIDEVLVSLFRTPHSYTGEDSTEITCHGSTYILQQVMQLLIK-NGCRMAQPGE 114

Query: 110 FSERAFLNDKMDLTQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHLRIYV 169
           +++RAFLN KMDL+QAEA+ADLI +SS    + A+  ++G FSK +  L   L++    +
Sbjct: 115 YTQRAFLNGKMDLSQAEAVADLIASSSAATHRLAMSQMRGGFSKELTDLRNKLLNFTSMI 174

Query: 170 EAAIDFPEEEIDFL---ADGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNA 226
           E  +DF EE+++F    A  K++ +++ +I  LA      + G  ++ G+ V I G  NA
Sbjct: 175 ELELDFSEEDVEFADRSALRKLADEIEQVISRLA---HSFSVGNAIKNGVPVAIIGETNA 231

Query: 227 GKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIE 286
           GKS+LLN L  ++ AIV+DI GTTRDV+ + ++I G+    IDTAG+R+ +D +E +GIE
Sbjct: 232 GKSTLLNVLLNEDKAIVSDIHGTTRDVIEDTVNIGGITFRFIDTAGIRETNDTIESLGIE 291

Query: 287 RAWEEIRQADRVLFMVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNKAD-----QTGE 341
           R ++++ QA+ VL+MVD     A+  + +    + +  E   + V+ NKAD     Q  +
Sbjct: 292 RTFQKLDQAEIVLWMVDAVNA-ASQIEQLSEKIIPRC-EGKHLIVVFNKADLIEGKQKED 349

Query: 342 PLGICH---VNQPTLIRLSAKTGQGVDALRQHLKECMGF-SGNQEGGFMARRRHLDALER 397
            L +           I +SAK  +    L++ L +     +  Q    +   RH +AL +
Sbjct: 350 LLSLLKDFPKESTESIFISAKQRENTSELQKMLIDAAHLPTVTQNDIIVTNVRHYEALNK 409

Query: 398 AAEHLAIGQQQLEGYMAGEILAEELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK 453
           A E +   Q  L+  ++G+ L++++R     +++I GE ++D +L  IF  FCIGK
Sbjct: 410 ALEAIHRVQNGLDSQISGDFLSQDIRECIFFISDIAGEVTNDMVLQNIFQHFCIGK 465