Pairwise Alignments

Query, 329 a.a., L-arabinose ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a ΔmexB

Subject, 334 a.a., L-arabinose ABC transporter permease AraH from Rahnella sp. WP5

 Score =  384 bits (986), Expect = e-111
 Identities = 195/313 (62%), Positives = 240/313 (76%)

Query: 17  APRQGMNLRRFADDWVMLLAAVGIFLLCAVFIDNFMSPLNMRGLGLAISTVGIAACTMLF 76
           A R G  L R  D + ML+    +F+ C +F+ NF S +NM+GLGLAIS  G+ AC MLF
Sbjct: 17  ASRGGQGLMRIWDSYGMLVVFAVLFIACTIFVPNFSSFINMKGLGLAISMSGMVACGMLF 76

Query: 77  CLASGHFDLSVGSVLACSGVIASIVIRDTDSVFLGVSAALALGLVVGLINGIVIAKLRIN 136
           CLASG FDLSV SV+AC+GV  ++VI  T+S+++GV+A L LG++ GL+NG VIA+L+IN
Sbjct: 77  CLASGDFDLSVASVIACAGVTTAVVINMTESLWIGVAAGLLLGMLTGLLNGFVIARLKIN 136

Query: 137 ALITTLATMQIVRGLAYIFSNGKAVGVSNEDFFIFGNGQVYGVPVPILITIACFIFFGWL 196
           ALITTLATMQIVRGLAYI S+GKAVG+ +E FF  G     G+P PI +T+ C I FG L
Sbjct: 137 ALITTLATMQIVRGLAYIISDGKAVGIEDERFFTLGYANWLGLPAPIWLTVGCLIIFGLL 196

Query: 197 LNYTTYGRNTMAIGGNQEAALLAGVHVDRTKIIIFAVHGLVGALAGVVLASRMTSGQPMI 256
           LN TT+GRNT+AIGGN++AA LAGV V RTKIIIF + GLV A AG++LASRMTSGQPM 
Sbjct: 197 LNKTTFGRNTLAIGGNEDAARLAGVPVVRTKIIIFVLSGLVSAAAGIILASRMTSGQPMT 256

Query: 257 GQGFELTIISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGTI 316
             GFEL +ISACVLGGVSL GGIG I +V++G+LIL  +ENAMNL NI  F QYV+RG I
Sbjct: 257 SLGFELIVISACVLGGVSLKGGIGKISYVVSGILILGTVENAMNLLNISPFSQYVVRGLI 316

Query: 317 LLLAVIIDRMKRR 329
           LL AVI DR K++
Sbjct: 317 LLAAVIFDRYKQK 329