Pairwise Alignments

Query, 329 a.a., L-arabinose ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a ΔmexB

Subject, 323 a.a., ribose ABC transporter permease from Rahnella sp. WP5

 Score =  207 bits (528), Expect = 2e-58
 Identities = 109/313 (34%), Positives = 183/313 (58%), Gaps = 8/313 (2%)

Query: 25  RRFADDWVM----LLAAVGIFLLCAVFIDNFMSPLNMRGLGLAISTVGIAACTMLFCLAS 80
           R  + +W++    L+A + +  + +    NF +  N+  +    S   I A  M   + +
Sbjct: 11  RWISKEWLLEQKSLIALLVLIAVVSSMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILT 70

Query: 81  GHFDLSVGSVLACSGVIASIVIRDTDSVFLGVSAALALGLVVGLINGIVIAKLRINALIT 140
              DLSVGS+LA +G +A+ ++    + F+ V AALALG  VG + G+++AK ++ A I 
Sbjct: 71  SGIDLSVGSLLALTGAVAASIVGLEVNAFVAVCAALALGAAVGGVTGMIVAKGKVQAFIA 130

Query: 141 TLATMQIVRGLAYIFSNGKAVGVSNED----FFIFGNGQVYGVPVPILITIACFIFFGWL 196
           TL  M ++RG+  +++NG  +     D    F  FG G+  G+P P+ +    FI   ++
Sbjct: 131 TLVMMLLLRGITMVYTNGSPISTGFNDVADVFGWFGIGRPLGIPTPVWLMAVVFIAAWYM 190

Query: 197 LNYTTYGRNTMAIGGNQEAALLAGVHVDRTKIIIFAVHGLVGALAGVVLASRMTSGQPMI 256
           L++T  GR   A+GGN+ A  L+G+ VD+ KII++++ GL+ ALA ++  +R++S QP  
Sbjct: 191 LHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLAALASIIEVARLSSAQPNA 250

Query: 257 GQGFELTIISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGTI 316
           G G+EL  I+A VLGG SLSGG G I   + G LIL  + N +NL  + ++YQ +++  +
Sbjct: 251 GTGYELDAIAAVVLGGTSLSGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVV 310

Query: 317 LLLAVIIDRMKRR 329
           +LLAV++D    +
Sbjct: 311 ILLAVLVDNKSNK 323