Pairwise Alignments

Query, 329 a.a., L-arabinose ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a ΔmexB

Subject, 326 a.a., ribose ABC transporter permease from Pantoea sp. MT58

 Score =  189 bits (480), Expect = 8e-53
 Identities = 114/303 (37%), Positives = 168/303 (55%), Gaps = 7/303 (2%)

Query: 34  LLAAVGIF----LLCAVF---IDNFMSPLNMRGLGLAISTVGIAACTMLFCLASGHFDLS 86
           LL  VGI     L+ AVF     NF +  N+  +    S   + A  M F + +G  DLS
Sbjct: 20  LLQTVGILPILILIVAVFGFVTPNFFTEANLLNITRQASINIVLAAGMTFVILTGGIDLS 79

Query: 87  VGSVLACSGVIASIVIRDTDSVFLGVSAALALGLVVGLINGIVIAKLRINALITTLATMQ 146
           VGS+L  + V+A +   D     L +  AL  GLV+GL NGI++A   +   I TL T  
Sbjct: 80  VGSMLGTTAVVALVASLDPMLASLTIPMALGAGLVMGLFNGILVAWAGLPPFIVTLGTYT 139

Query: 147 IVRGLAYIFSNGKAVGVSNEDFFIFGNGQVYGVPVPILITIACFIFFGWLLNYTTYGRNT 206
            +RG AY+ +NG  V  S+ +F   GNG +  VP  I+I  A      ++L  TT G + 
Sbjct: 140 ALRGAAYLLANGTTVINSDINFEWIGNGYLGPVPWLIVIAFAVIAICWFILRRTTLGVHI 199

Query: 207 MAIGGNQEAALLAGVHVDRTKIIIFAVHGLVGALAGVVLASRMTSGQPMIGQGFELTIIS 266
            A+GGN +AA L G+ V    + ++ + GL+  LAG++ ASR+ S    +G G+EL  I+
Sbjct: 200 YAVGGNIQAARLTGIKVGVVLLFVYGMSGLLSGLAGLMSASRLYSANGNLGVGYELDAIA 259

Query: 267 ACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGTILLLAVIIDRM 326
           A +LGG S  GGIG I   + G LI+A + N M L  +  F+Q VI+G ++++AV+ID+ 
Sbjct: 260 AVILGGTSFVGGIGTITGTLIGALIIATLNNGMTLMGVSYFWQLVIKGAVIIIAVLIDKY 319

Query: 327 KRR 329
           + R
Sbjct: 320 RTR 322