Pairwise Alignments

Query, 171 a.a., RHS protein from Pseudomonas syringae pv. syringae B728a

Subject, 1404 a.a., type IV secretion protein Rhs from Escherichia coli ECRC102

 Score =  109 bits (273), Expect = 2e-28
 Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 1/114 (0%)

Query: 3    EKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWG-AVEKLVVNEVEQNLRFQG 61
            E E   E K++ +H D  G PL +   EG+  WQ +Y  WG  + +     ++Q+LR  G
Sbjct: 1140 EAEYIPERKLHLYHCDHRGLPLALISPEGETAWQGEYDEWGNLLGETSAQHLQQSLRLPG 1199

Query: 62   QYFDVETGLHYNTFRYYDPEIGRFITQDPIGLLGGFNLYGYAPSPTGWVDPYGL 115
            Q +D E+GL+YN  RYYDP  GR+ITQDPIGL GG+NLY Y  +P   +DP GL
Sbjct: 1200 QQYDEESGLYYNRNRYYDPLQGRYITQDPIGLEGGWNLYQYPLNPIEHIDPLGL 1253