Pairwise Alignments

Query, 137 a.a., rhs-related protein from Pseudomonas syringae pv. syringae B728a

Subject, 1404 a.a., type IV secretion protein Rhs from Escherichia coli ECRC102

 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 9/79 (11%)

Query: 36   DNRLKQWANHEYKYDAWGNLIEKV----VGIVRWQT-----FTYDCENRLVKTETMADTQ 86
            DNR+ + A++ Y+YD +G L EK      G++R        + YD ++RLV    +   +
Sbjct: 937  DNRIAEDAHYVYRYDEYGRLAEKTDRIPEGVIRMHDERTHHYHYDSQHRLVFHTRIQHGE 996

Query: 87   VESTSSYQYDSLGRRVAKQ 105
             +  S Y YD LGRR  K+
Sbjct: 997  PQVESRYLYDPLGRRTGKR 1015



 Score = 31.6 bits (70), Expect = 5e-05
 Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 7/91 (7%)

Query: 46  EYKYDAWGNLIEKVVGIVRWQTFTYDCENRLVKTETMADTQVESTSSYQYDSLGRRVAKQ 105
           E +YDAWG  +    G +  ++  YD   R+    T+   +  S S+++YD +  R+ +Q
Sbjct: 623 EIQYDAWGKAVSTTQGGLT-RSMGYDAAGRI----TVLTNENGSQSTFRYDPVD-RLTEQ 676

Query: 106 SEIKGQTDHKRFLWQGLRMLREESPGQSSLY 136
               G+T    +   G ++ + E  G  +L+
Sbjct: 677 RGFDGRTQRYHYDLTG-KLTQSEDEGLVTLW 706