Pairwise Alignments

Query, 356 a.a., Protein of unknown function DUF1305 from Pseudomonas syringae pv. syringae B728a

Subject, 337 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score =  102 bits (255), Expect = 1e-26
 Identities = 76/289 (26%), Positives = 119/289 (41%), Gaps = 13/289 (4%)

Query: 51  DPLRFRSQLSLNFPASEVSDLQFEREGKLSAAGLPLSEVQVTFMGLVGPSGVLPRPYTEL 110
           D L F +   L FP  ++  ++F  E +   A L L+      +GL G    LP  Y E 
Sbjct: 49  DLLEFHANPGLGFPGHDIDRVEFFIEHEQLRARLRLN-----LLGLCGAGSPLPAFYGEQ 103

Query: 111 LIDRHIQYRDDAAHAFLDIFSHRMTTLFYEAWQKYKFYIEYERNGTSNFDRYLLNLVGFG 170
                +    +    FLD+F HR+  L    W+KY++   ++      F   +  L+G  
Sbjct: 104 ACADGVG--GNTTRDFLDVFHHRLQRLMLPVWRKYRYRARFQAGARDTFSEQMFALIGLS 161

Query: 171 PEGLKQKFDKGESPLRRELFSYFSGMFAQKPRNALNLEVMLSFYFSLP-FKIQQFAGRWL 229
            + ++       + L  E    + GM   +  +A  +E +L +YF      I+Q+  R +
Sbjct: 162 GQQIRSI-----ARLNCERLLPYLGMLGLRSHSASLIETVLRYYFKHHRLFIEQWVLRTV 216

Query: 230 KLDSSQCTQLGRKNAVLGQSAVAGNRVWDYQSCVRIEMGPLELADYQRFQPGTEDYQKLV 289
            +D  Q  +LG  N+VLG   V G RV D     R+ +  L       F P   DY  L 
Sbjct: 217 VIDDPQRNRLGNANSVLGHDQVLGCRVADRSGKFRVHLQGLGWQQLHGFLPTGADYPLLC 276

Query: 290 ELVRFYIGAELDFQIAPELKREAVPVARLGRQGNVSLGWLGWLKRPGVD 338
            LVR      L++ +   L +E +    +G      LGW  WL     D
Sbjct: 277 SLVRLTARDPLEYDLRLVLAKEEIRPLHIGEHNVCGLGWTSWLAHECAD 325