Pairwise Alignments

Query, 317 a.a., SdiA-regulated from Pseudomonas syringae pv. syringae B728a

Subject, 304 a.a., DNA-binding protein from Pseudomonas simiae WCS417

 Score =  371 bits (953), Expect = e-107
 Identities = 198/303 (65%), Positives = 232/303 (76%), Gaps = 3/303 (0%)

Query: 17  MRRSTRS--LVLLLALVPLIVIFVIANQRYRYVESALFDWQVFWQSDSLHSIGLDQYRVV 74
           MRR  R   L   LAL+ L+   V+A Q +R  E A F+WQ + Q  +  SIGL  YRV 
Sbjct: 1   MRRLARPKPLFFTLALIALVSAGVVA-QHFRLFERAWFNWQAWRQPTNERSIGLADYRVA 59

Query: 75  TEAQVIDGLQDDVSGLSYDPDRKSLFTVTNQNPELVELSLDGRVLRRIPLVGFGDAEAVE 134
            EAQVI+GL DDVS L+YDP RKSLFTVTN+N EL+ELSL+G++LRRIPLVGFGDAEAVE
Sbjct: 60  LEAQVIEGLDDDVSALTYDPVRKSLFTVTNKNAELIELSLEGKILRRIPLVGFGDAEAVE 119

Query: 135 YISPGTYVISDERRLRLIQIHVDDNTKSLDAAQAEQLTLGITASGNKGYEGLAYDSVGKR 194
           +IS   YVISDER+ RLI++HV+D+T+ LDAA AEQ+TLG+   GNKG+EGLAYDSVGKR
Sbjct: 120 FISDNIYVISDERQQRLIKVHVNDDTQFLDAADAEQMTLGVHVGGNKGFEGLAYDSVGKR 179

Query: 195 LFVARERDPVQIIEVRGFPRTNSEAPGNLQVISNSKRDGRLSVRDLSSLQFDETSGHLLA 254
           LFVA+ERDP+ I EV GFP    E   ++ VI+N KRD  L VRDLSSLQ+DE SGHLLA
Sbjct: 180 LFVAKERDPMLIYEVHGFPHFKPEKTYSVHVINNPKRDAGLFVRDLSSLQYDERSGHLLA 239

Query: 255 LSDESKRILELDTSGHPIGSGSLAKGAMGLSKDVPQAEGMAMDAEGALYLVSEPNLFYVF 314
           LSDES  +LELD  G P+ S SL  G  GL K VPQAEG+AMD EGALYLVSEPNLFYVF
Sbjct: 240 LSDESFLVLELDIDGRPLSSLSLLNGRHGLKKRVPQAEGIAMDDEGALYLVSEPNLFYVF 299

Query: 315 RKP 317
           +KP
Sbjct: 300 KKP 302