Pairwise Alignments

Query, 255 a.a., Heat shock protein DnaJ, N-terminal from Pseudomonas syringae pv. syringae B728a

Subject, 271 a.a., membrane-anchored DnaK co-chaperone, DNA-binding protein from Escherichia coli BL21

 Score =  105 bits (262), Expect = 1e-27
 Identities = 83/275 (30%), Positives = 129/275 (46%), Gaps = 26/275 (9%)

Query: 1   MLWPGTLIGAGAGYAIAS-IPGAMLGALLGQALDR-RLKLQSW-AHLRERLGGRAAIPQN 57
           M + G +IG      +     G +LG L+G   D+ R +  +W A+ RER     A    
Sbjct: 1   MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATT-- 58

Query: 58  DLLFVLLGRLAKSGGRVLASHIHQARIEMRRLNLNETDQLRAINAFKRGRDGSDGLRSYL 117
              F ++G L KS GRV  + IH A   M R+NL+   +  A NAF+ G+  +  LR  +
Sbjct: 59  ---FEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKM 115

Query: 118 RGLQ----GQPDIAEDMLRACWRMAWADGKASRVERELIGVWGMWLGWTGPQIEAL---- 169
           R  +    G+ D+    L    + A+ADG     ER ++ V    LG +  Q +      
Sbjct: 116 RQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMM 175

Query: 170 --AADHDPTKRSPISSGD--------DYKSAMTLLGVRSDTDPLSIKRAYRRLLSRHHPD 219
              A      +     G+          + A  +LGV+   D  +IKRAYR+L+S HHPD
Sbjct: 176 QGGAQFGGGYQQQTGGGNWLQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPD 235

Query: 220 KIAGSGANPQQVRVATEKTSELHNAYRVVKARRGF 254
           K+   G  P+ + +A +K  E+  AY ++K ++GF
Sbjct: 236 KLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGF 270