Pairwise Alignments

Query, 297 a.a., carbohydrate ABC transporter membrane protein 1, CUT1 family from Pseudomonas syringae pv. syringae B728a

Subject, 293 a.a., Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  202 bits (515), Expect = 6e-57
 Identities = 102/289 (35%), Positives = 170/289 (58%)

Query: 1   MKPRAHFPQPRLALLFALPQLLALGLFFYWPAVQAIWWSFHLVPPFGGNEIFVGLSNYWR 60
           M+ R  F    L      PQL  + +FF+WPA QA+  SF +   FG ++ +VGL N+  
Sbjct: 1   MEKRVLFRSSWLPWALLAPQLAIISIFFFWPAGQALVQSFQVQDSFGFSKEWVGLENFRN 60

Query: 61  VLRDPGVLASLGSTLVFSLSSVVLSVLIALVLALCLELKLRGNAVVRNLLIWPYAVSGAT 120
           +  DP  LAS  +T  FS+      + I+LVLA+  +  ++G    +  L+ PYAV+ A 
Sbjct: 61  LFNDPSYLASFKTTAFFSVMVAGFGIGISLVLAIFADRIVKGALGYKTALLLPYAVAPAV 120

Query: 121 IGIVFHVLANPVMGIFAWLNAIAPGTWAPYASPIQSMLLLIVAYAWCLVPFNFVMLVASL 180
            G+++  + +P +G+ A++   +   W    +   +M L+++A  W  + +NF+  +A L
Sbjct: 121 AGVLWMFMFSPSLGVVAYMLRQSGFNWNHMLNSDHAMTLIVIAAVWKQISYNFLFFLAGL 180

Query: 181 KSVPDDYLAAAALDGAGPLRRMLDIQLPLIAPYLLFVFVIDLLESLSNSFGLVDTLTQGG 240
           +S+P   + AAA+DGAGP RR   IQ PL++P   F+ VI+++ +  ++F +VD  TQGG
Sbjct: 181 QSIPKSLIEAAAIDGAGPWRRFWSIQFPLLSPTTFFLLVINVVYAFFDTFAIVDATTQGG 240

Query: 241 PGDTTNVLAYKIYTDGFMGLDLAGSSTLSVLMLLAVVALSVAQFTLLSR 289
           PG  T +L YK+Y DGF  +D+ GS+  SV++++ V+ L+V QF  + +
Sbjct: 241 PGRDTAILVYKVYHDGFKAMDMGGSAAQSVVLMVIVIVLTVIQFRYVEK 289