Pairwise Alignments

Query, 337 a.a., tRNA-U20-dihydrouridine synthase from Pseudomonas syringae pv. syringae B728a

Subject, 344 a.a., tRNA dihydrouridine synthase B (EC 1.-.-.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  358 bits (920), Expect = e-104
 Identities = 191/322 (59%), Positives = 231/322 (71%), Gaps = 7/322 (2%)

Query: 4   VRIGPYTVQNGLILAPMAGVTDQPFRQLCRRLGAGLVVSEMVTSDMSLWNSRKSRLRMIH 63
           +++G +T+ N L +APMAGVTD+PFR+LC+RLGAG  VSEMVTS   L +S K+  R  H
Sbjct: 1   MQLGAFTLPNALFVAPMAGVTDRPFRKLCKRLGAGYAVSEMVTSRPDLQDSLKTSRRANH 60

Query: 64  EGDPEPRSVQIAGGDPQMLADAARANVELGAQIIDINMGCPAKKVCNKAAGSALLKDEQL 123
           EG+  P SVQIAG D QM+ADAAR N++ GAQIIDINMGCPAKKVCNK AGSAL++DE L
Sbjct: 61  EGEAAPISVQIAGTDAQMMADAARYNIDRGAQIIDINMGCPAKKVCNKWAGSALMQDEAL 120

Query: 124 VNDILQAVVAAVD---VPVTLKIRTGWDRDNRNGLTVAKIAEQAGITALAVHGRTRADLY 180
             +I+QAVVAA +   VPVTLK+RTGW    RN  T+A  AE AG+  L VHGRTR   Y
Sbjct: 121 AIEIVQAVVAACEPHGVPVTLKMRTGWCASVRNAPTLALAAEAAGVQMLTVHGRTREQGY 180

Query: 181 TGEAEYDTIALIKQAVSIPVFANGDIDSPEKARHVLKATGADGLLIGRAAQGRPWIFREI 240
            G+AE+DT+A IK  V IPV ANGDIDSPE+AR VL+ TGAD +++GRAAQGRPWIFREI
Sbjct: 181 KGQAEHDTVAHIKSRVRIPVVANGDIDSPEQAREVLRRTGADAIMVGRAAQGRPWIFREI 240

Query: 241 EHFLRTGETLPAPQSSEVERILLEHLAALHVFYGDVMGVRIARKHVSWYLATLP----GA 296
            HFL TGE LP P  ++V   LL+HL   +  YG+  GVR ARKH+ WY  +LP     A
Sbjct: 241 AHFLATGEHLPPPDLADVRVWLLDHLHDHYDLYGEDTGVRSARKHLGWYAQSLPLPPGAA 300

Query: 297 REFRAHFNRLEDTEAQCANVRE 318
             FR+  N +   EAQ   V E
Sbjct: 301 ALFRSRVNAVTTVEAQLRCVSE 322