Pairwise Alignments

Query, 337 a.a., tRNA-U20-dihydrouridine synthase from Pseudomonas syringae pv. syringae B728a

Subject, 321 a.a., tRNA dihydrouridine synthase DusB from Serratia liquefaciens MT49

 Score =  369 bits (947), Expect = e-107
 Identities = 190/317 (59%), Positives = 228/317 (71%)

Query: 4   VRIGPYTVQNGLILAPMAGVTDQPFRQLCRRLGAGLVVSEMVTSDMSLWNSRKSRLRMIH 63
           +RIG + + N LI APMAG+TD+PFR LC  +GAG+ VSEM++S+  +W + KSRLRM+H
Sbjct: 1   MRIGHHQLTNCLIAAPMAGITDRPFRTLCHAMGAGMAVSEMLSSNPEVWRTDKSRLRMVH 60

Query: 64  EGDPEPRSVQIAGGDPQMLADAARANVELGAQIIDINMGCPAKKVCNKAAGSALLKDEQL 123
             +P  RSVQIAG DP  +A AAR NV  GAQIIDINMGCPAKKV  K AGSALL+   L
Sbjct: 61  SDEPGIRSVQIAGCDPDDMAAAARINVAGGAQIIDINMGCPAKKVNRKLAGSALLQYPDL 120

Query: 124 VNDILQAVVAAVDVPVTLKIRTGWDRDNRNGLTVAKIAEQAGITALAVHGRTRADLYTGE 183
           V  IL AVV AVDVPVTLKIRTGW  ++RN + +A++AE  GI AL +HGRTRA L+ G 
Sbjct: 121 VKQILHAVVNAVDVPVTLKIRTGWAPEHRNCVEIAQLAEDCGIQALTIHGRTRACLFNGN 180

Query: 184 AEYDTIALIKQAVSIPVFANGDIDSPEKARHVLKATGADGLLIGRAAQGRPWIFREIEHF 243
           AEYD+I  +KQ VSIP+ ANGDI  P KAR VL  TGAD L+IGRAAQGRPWIFREI+H+
Sbjct: 181 AEYDSIRAVKQNVSIPIIANGDITDPHKARAVLDYTGADALMIGRAAQGRPWIFREIQHY 240

Query: 244 LRTGETLPAPQSSEVERILLEHLAALHVFYGDVMGVRIARKHVSWYLATLPGAREFRAHF 303
           L TGE LP     EV+R+L+ H+  LH FYG   G RIARKHVSWYL       +FR  F
Sbjct: 241 LDTGELLPPLPLGEVKRLLIGHIRELHGFYGQGKGFRIARKHVSWYLQEHAPNDQFRRTF 300

Query: 304 NRLEDTEAQCANVREFF 320
           N +ED   Q   +  +F
Sbjct: 301 NAIEDASEQLEALEAYF 317