Pairwise Alignments

Query, 542 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

Subject, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  771 bits (1990), Expect = 0.0
 Identities = 376/537 (70%), Positives = 433/537 (80%), Gaps = 11/537 (2%)

Query: 6   VIPFLVGASLLASAPFAHAAS--NLVFCSEGSPAGFDPGQYTTGTDFDASAETIFNRLSQ 63
           V+  +   SLLA A   HAA   +LVFCSEGSPAGFD  QYTT TD DA AE ++NRL +
Sbjct: 6   VLSAMFATSLLAVATMGHAADKRSLVFCSEGSPAGFDTAQYTTATDNDA-AEPLYNRLVE 64

Query: 64  FERGGTAVVPGLATKWDISEDGLTYTFHLREGVKFHTTPYFKPTREFNADDVLFTFNRMI 123
           FE+G T VVP LATKWDIS DG+TYTFHLREGVKFH+   FKPTR+FNADDVLFTFNRM+
Sbjct: 65  FEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFNRML 124

Query: 124 DKDMPYRKAYPTEFPYFTDMAMDTNIKKIEKIDDHTVKFVLGMVDAAFIQNMAMSFASIQ 183
           D D P+RKAYPTEFPYF  M+++ NI K+EK D HTV   L  VDAAFIQN+AMSFA+I 
Sbjct: 125 DPDHPFRKAYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFAAIL 184

Query: 184 SAEYAAKLLKEGKPELINQQPIGTGPFVFKSYQKDSNIRYTGNKDYWKPEDVKVDNLIFA 243
           SAEYA +LLK GKP  INQ+PIGTGPFVF+ YQKDS IRY  NK YW P  VK+D LIFA
Sbjct: 185 SAEYAEQLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLDQLIFA 244

Query: 244 ITTDASVRMQKLKKNECQITAYPRPADLEPLKADKNLKMPDQAGFNLGYIAYNVMPQIKG 303
           I TDASVR+QKLK  ECQ+T +PRPAD++ LKAD NLK+  + GFNLGYIAYNV  +   
Sbjct: 245 INTDASVRVQKLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVRHK--- 301

Query: 304 EDHPNPLAQLEVRQALDMAVNKQQIIDSVYQGAGQLAVNAMPPTQWSYDTTIKDAKYDPE 363
                P  QLEVRQALDMAVNKQ I+++VYQGAGQLAVNAMPPTQWSYD +IKDA Y+PE
Sbjct: 302 -----PFDQLEVRQALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKDAAYNPE 356

Query: 364 KARQLLKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWKKIGINAKIVSYEWGEY 423
           KA++LLK AG+KEGTEITLWAMPVQRPYNPNAKLMAEMLQSDW KIG+  KIVSYEWGEY
Sbjct: 357 KAKELLKAAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEY 416

Query: 424 IKRAKNGENGAMLIGWSGDNGDPDNWLGTLFGCDAVNGNNFAKWCDKPFDTLIHQAKQTS 483
           IKR KNGE+   LIGW+GDNGDPDNWLGTL+ CDA+ GNN++ WCD  +D LI QAK  +
Sbjct: 417 IKRTKNGEHDVSLIGWTGDNGDPDNWLGTLYSCDAIGGNNYSMWCDPAYDKLIKQAKVVT 476

Query: 484 DQAERTKLYKQAQHLLKDAVPMTPIAHSTVYQPMSSKVQDFKISPFGLNSFYGVSVS 540
           D+ +RT LYKQAQ LLK  VP+TP+AHSTV QP+S+KV+ FK+SPFG N F GVS++
Sbjct: 477 DREQRTVLYKQAQQLLKQQVPITPVAHSTVNQPLSAKVEGFKVSPFGRNVFSGVSIT 533