Pairwise Alignments

Query, 319 a.a., D-alanine--D-alanine ligase from Pseudomonas syringae pv. syringae B728a

Subject, 1073 a.a., carbamoyl phosphate synthase large subunit from Pseudomonas simiae WCS417

 Score = 53.1 bits (126), Expect = 3e-11
 Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 16/258 (6%)

Query: 60  DDFLQRLVSEKIDRAFIVLHGRGGEDGTMQGLLECLEIPYTGSGVLASALAMDKLRTKQV 119
           +D L+ +  EK  +  IV +G G     +   LE   +P  G+   A   A D+ R +Q+
Sbjct: 623 EDVLEIVRVEK-PKGVIVQYG-GQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQM 680

Query: 120 WQSLGLATPAHAVLENESDCICAATELGLPLIVKPAHEGSSIGMAKVNSVDELIAAWKAA 179
            + L L  P +A + +E + I AA+++G PL+V+P++      M  V   +EL    + A
Sbjct: 681 VERLNLRQPPNATVRSEDEAIRAASKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDA 740

Query: 180 --STYDSQVLVEQWIQ-GPEFTVASLRGQVLPPIGLGTPH--SFYDYDAKYLASDTQYRI 234
              + DS VL++ ++    E  V ++       IG    H      +      S   Y +
Sbjct: 741 VKVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL 800

Query: 235 PCGLGDAQEQELKQLAARACDAIGIAGWARTDVMQDAQGKFWLLEVNTVPGMTDHSLVPM 294
           P  + D   +++K++A      +G+ G     +    +   +++EVN     T    VP 
Sbjct: 801 PAHIQDEMREQVKKMALE----LGVVGLMNVQLALQGE-DIYVIEVNPRASRT----VPF 851

Query: 295 AARAAGLDFQQLVLAILA 312
            ++  G+    +   ++A
Sbjct: 852 VSKCIGVSLAMIAARVMA 869



 Score = 34.3 bits (77), Expect = 1e-05
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 2/108 (1%)

Query: 89  QGLLECLEIPYTGSGVLASALAMDKLRTKQVWQSLGLATPAHAVLENESDCICAATELGL 148
           +G+LE   +   G+       A D+ R  +  +S+GLA P   +  +  +       LG 
Sbjct: 105 EGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLETLGF 164

Query: 149 PLIVKPAHE--GSSIGMAKVNSVDELIAAWKAASTYDSQVLVEQWIQG 194
           P I++P+    G+  G+A      E I A     +   ++L+++ + G
Sbjct: 165 PCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSPTKELLIDESLIG 212