Pairwise Alignments

Query, 319 a.a., D-alanine--D-alanine ligase from Pseudomonas syringae pv. syringae B728a

Subject, 364 a.a., D-alanylalanine synthetase (NCBI) from Escherichia coli BW25113

 Score =  149 bits (375), Expect = 1e-40
 Identities = 109/344 (31%), Positives = 166/344 (48%), Gaps = 53/344 (15%)

Query: 20  RVAVLFGGKSAERAVSLNSGNAVLGALLEAGVDA--FGID-------------------- 57
           RV ++FGGKSAE  VSL S   ++ A+ ++  D    GID                    
Sbjct: 5   RVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGIDKQGQWHVSDASNYLLNADDP 64

Query: 58  --------------VGDDFLQRLVSEK-------IDRAFIVLHGRGGEDGTMQGLLECLE 96
                         V      +L+  +       +D  F ++HG  GEDG++QG+L    
Sbjct: 65  AHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVIFPIVHGTLGEDGSLQGMLRVAN 124

Query: 97  IPYTGSGVLASALAMDKLRTKQVWQSLGLATPAHAVLE--NESDCICAATE--LGLPLIV 152
           +P+ GS VLASA  MDK  TK++ +  GL       L   N  +   A  E  LGLPL V
Sbjct: 125 LPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFV 184

Query: 153 KPAHEGSSIGMAKVNSVDELIAAWKAASTYDSQVLVEQWIQGPEFTVASLRGQVLPPIG- 211
           KPA++GSS+G++KV S ++   A   A  +D +V+VEQ I+G E   A L G   P    
Sbjct: 185 KPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKVIVEQGIKGREIECAVL-GNDNPQAST 243

Query: 212 ---LGTPHSFYDYDAKYLASD-TQYRIPCGLGDAQEQELKQLAARACDAIGIAGWARTDV 267
              +     FY YD KY+  D  +  +P  +      +++ +A +A   +G AG AR DV
Sbjct: 244 CGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAPEINDKIRAIAVQAYQTLGCAGMARVDV 303

Query: 268 MQDAQGKFWLLEVNTVPGMTDHSLVPMAARAAGLDFQQLVLAIL 311
               + +  + E+NT+PG T+ S+ P   +A+GL +  L+  ++
Sbjct: 304 FLTPENEVVINEINTLPGFTNISMYPKLWQASGLGYTDLITRLI 347