Pairwise Alignments

Query, 486 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

Subject, 467 a.a., efflux transporter outer membrane subunit from Serratia liquefaciens MT49

 Score =  465 bits (1196), Expect = e-135
 Identities = 246/469 (52%), Positives = 331/469 (70%), Gaps = 10/469 (2%)

Query: 5   LISLAVTAFILGGCSLIPDYKQPQAPVAAQYPQGPAYSPVEGAKMAAAEQGWRHFFNDPA 64
           L+++ +    L GCSL PDY++P APVA  YP     + V+G    AA  GWR F+ DP 
Sbjct: 4   LLAIMLATATLTGCSLTPDYQRPAAPVAPAYPDY-GVAQVDGT---AAAIGWREFYRDPL 59

Query: 65  LQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPGDQSQTGQ 124
           LQ LI  AL NNRDLR+AALN++A RA YRIQR+D  P ++A GSGS QR PG  S  GQ
Sbjct: 60  LQTLITQALTNNRDLRIAALNVEAARASYRIQRADTLPTLAAQGSGSVQRTPGRLSAGGQ 119

Query: 125 PGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFASEEARRSTQISLVASVANAYMTW 184
             +  SY    G  S+ELDLFGR+RSL++QALE Y A +E R + Q++L+A  ANAY++ 
Sbjct: 120 SAVGRSYQVG-GALSWELDLFGRLRSLNQQALELYLAQDETRAAAQLALIAETANAYLSL 178

Query: 185 QADKELLKLTQDTLKTYEESFRLTSRASEVGVSSALDLSQSRTAVESARAKLAQYQRLVA 244
           +AD ELL L Q+TL + + +F L  ++ ++GV++ LD SQ+   V +A+  LAQY+R V 
Sbjct: 179 RADSELLALAQETLSSQQAAFGLVEQSFQLGVATELDRSQAEVGVRTAQRDLAQYRRQVR 238

Query: 245 QDQNSLVLL----LGTSLPDNLPASHLLDSDMLTE-MPAGLPSDLLQRRPDILEAEHSLK 299
           QD N+L LL    LG+++   L  +  L  D+L E +PAGLP+DLL RRPDI  AEH L+
Sbjct: 239 QDTNALTLLVGQPLGSAMSSRLAQASTLPDDLLPETIPAGLPADLLTRRPDIRAAEHQLR 298

Query: 300 AANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPIFNAGNLRAS 359
           AANANIGAARAAFFP++SLT   GT+S+ L GLF  GSGAW F P +++PIF+ G+LRA 
Sbjct: 299 AANANIGAARAAFFPTLSLTGFGGTASAGLDGLFSAGSGAWSFVPQLSLPIFSGGSLRAG 358

Query: 360 LDYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQDYYRLAERR 419
           LD +++QK I VA YE+AIQ  F+E +D LA R T DEQ++AQ   VAANQ  Y L+++R
Sbjct: 359 LDLAEVQKRIEVARYEQAIQQGFRETADVLAGRDTLDEQIRAQTQLVAANQRAYALSQQR 418

Query: 420 YRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGWYE 468
           ++ G+D+ LT LD+QRSL++A+Q L+  RL++LT+ V+LY+ALGGGW E
Sbjct: 419 FQQGVDNYLTVLDSQRSLYAARQVLVDTRLARLTNLVDLYRALGGGWRE 467