Pairwise Alignments

Query, 486 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

Subject, 457 a.a., multidrug transporter from Escherichia coli ECRC98

 Score =  347 bits (891), Expect = e-100
 Identities = 199/462 (43%), Positives = 287/462 (62%), Gaps = 17/462 (3%)

Query: 7   SLAVTAFILGGC-SLIPDYKQPQAPVAAQYPQGPAYSPVEGAKMAAAEQGWRHFFNDPAL 65
           SL     +  GC SL P Y  P++P+       PA  P    +  A    W+   +DP L
Sbjct: 5   SLIFLVLLSAGCVSLDPHYSTPESPI-------PATLPGAQGQGKAISHDWQQVIHDPRL 57

Query: 66  QQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPGDQSQTGQP 125
           QQ++  AL +NRD++ A  +ID+ RA Y    + LFP V+A  S +R R   + ++T   
Sbjct: 58  QQVVTIALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLANGTET--- 114

Query: 126 GITSSYSATLGVSSYELDLFGRVRSLSEQALETYFASEEARRSTQISLVASVANAYMTWQ 185
             T+    T  VSS+ LDLFGR +SLS  A ET+ ASE   ++T+++L+A ++ A++T  
Sbjct: 115 --TAEADGT--VSSFTLDLFGRNQSLSRAARETWLASEFTAQNTRLTLIAEISTAWLTLA 170

Query: 186 ADKELLKLTQDTLKTYEESFRLTSRASEVGVSSALDLSQSRTAVESARAKLAQYQRLVAQ 245
           AD   L L ++T+ + E S ++  R  +VG ++A D+S++ +  + ARA +A YQ  V Q
Sbjct: 171 ADNSNLALAKETMTSAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQ 230

Query: 246 DQNSLVLLLGTSLPDNLPASHL--LDSDMLTEMPAGLPSDLLQRRPDILEAEHSLKAANA 303
           D+N+L LL GT+L +NL    L  L   M++ +PAG+ SD+L RRPDI EAEH+LK+ANA
Sbjct: 231 DKNALNLLAGTTLEENLLPGTLESLPEQMISLVPAGVSSDVLLRRPDIQEAEHNLKSANA 290

Query: 304 NIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPIFNAGNLRASLDYS 363
           +IGAARA FFP+ISLTASAG  S  LS LF  G   W F PS+ +P+F  G+  A L Y+
Sbjct: 291 DIGAARANFFPTISLTASAGVGSDALSSLFSHGMQIWSFTPSVTLPLFTGGSNLAQLRYA 350

Query: 364 KIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQDYYRLAERRYRIG 423
           + QK   +A YEK +Q AF++V++ LA R T +EQL AQR +V A Q    +  RRY+ G
Sbjct: 351 EAQKRGLIATYEKTVQRAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQTG 410

Query: 424 IDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGG 465
           +   LT L AQRSL+SAQQ L+  +L+  T+ + L+++LGGG
Sbjct: 411 VGDYLTVLTAQRSLWSAQQELLALQLTDFTNRITLWQSLGGG 452