Pairwise Alignments

Query, 714 a.a., Helicase c2 from Pseudomonas syringae pv. syringae B728a

Subject, 725 a.a., Rad3-related DNA helicases from Enterobacter asburiae PDN3

 Score =  320 bits (821), Expect = 1e-91
 Identities = 242/730 (33%), Positives = 358/730 (49%), Gaps = 64/730 (8%)

Query: 2   ISTELKTQIQGAYSRFLEAK--SLKPRYGQRLMIAEVAKVLGDIDTDEEGRRSGDPAVVA 59
           ++  LK QI GA+ + L+ +     PR  QR MIA+VAK L      ++GR       +A
Sbjct: 3   LTAALKAQI-GAWYKALQQQIPDFIPRAPQRQMIADVAKTLAG----DDGRH------LA 51

Query: 60  VEAGTGTGKTVAYAIASIPTAKAAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFTFA 119
           +EA TG GKT++Y I  I  A+   K LV++TA VALQ+QI  KDLP L+R    +  F 
Sbjct: 52  IEAPTGVGKTLSYLIPGIAIAREEDKTLVVSTANVALQDQIFSKDLP-LLRKIIPDLRFT 110

Query: 120 LAKGRGRYMCLSKLDALLQESDATNATAQLFEEEGFKIEVDEASQKLFTSMLQKLAGNKW 179
            A GRGRY+C   L AL              ++E      ++A Q+    +  +L G KW
Sbjct: 111 AAFGRGRYVCPRNLAALASSEPNQQDLLAFLDDE--LTPNNKAEQEQCAKLKAELDGYKW 168

Query: 180 DGDRDSWPQELADQDWARLTTDHSQCTNRHCPNFQQCAFYKAREGMGKVDVIVTNHDMVL 239
           DG RD   Q ++D  W RL+TD + C NR+C  +++C F+ AR  + + +V+V NH +V+
Sbjct: 169 DGLRDHTSQAISDDLWRRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVM 228

Query: 240 ADLALGGGAVLPDPRDTLYVFDEGHHLPDKAIGHFAHYTRLKSTADWLEQTAKNLAKLLA 299
           A  AL   AVLP+P++ L V DEGHHLPD  +   A     + TA W         KL+A
Sbjct: 229 A--ALESEAVLPEPKNLLLVLDEGHHLPD--VARDALEMSAEITAPWFRLQLDLFCKLVA 284

Query: 300 QHPLPGDLGKLIEQ-----VPELA--REIKGHQQFMFGACEQLADFRAGEDMQGRERPRH 352
                      +EQ      P LA    +  H + ++G    L +      +   +   H
Sbjct: 285 T---------CMEQFRPKTTPPLAVPERLSDHCEEVYGLIASLNNI-LNLYLPATQEAEH 334

Query: 353 RFVGGVIPEHIREMGIELKKGFARLDDLFTRLTELLKEGMDGEVNIGIASHQAEEWYPLF 412
           RF  G +PE +  +   L K   +L  L       L E           SH     + + 
Sbjct: 335 RFAMGELPEEVMAICQHLAKHLEKLRGLAEMFLNDLSEKT--------GSHDVVRLHRVL 386

Query: 413 GSLLARAHGNWE----LWTAFTAEDPEDSPPMARWLTLADSGAMFDIEVNASPILAAEML 468
             +  RA G +E    LW   +      +P + +W T         +  +   I  A+ L
Sbjct: 387 LQM-NRALGMFEAQSKLWRLASMAQASGAP-VTKWATRDVRDGQVHLFFHCVGIRVADQL 444

Query: 469 RRNLWNIAYGALVTSATLTALGKFDRYRMRAGLPKGAVTAVVP--SPFHHADAGVLRVPD 526
            + +W      +VTSATL +L  F R +  +GL + A    V   SPF+H + G L +P 
Sbjct: 445 EKLIWRSVPHVVVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKLVIPR 504

Query: 527 LKADP-----RDSVAHTAAIIRDLPGLVEGSR--GTLVLYSSRKQMQDVFDGLDRDWRKQ 579
           +K +P        +A  AA  R+    VE  +  G LVL++S + MQ   + +  D R  
Sbjct: 505 MKFEPLIDNEEQHIAEMAAYFREQ---VESKKYPGMLVLFASGRAMQRFLEHVT-DLRLL 560

Query: 580 VFIQGNLSKQETLNKHKARVDSGESSVLFGLASFAEGVDLPGAYCEHVVIAKIPFAVPDD 639
           + +QG+  +   +  H+ R+D+GE SVL GL SFAEG+DL G Y   V I KI F   D 
Sbjct: 561 LLVQGDQPRYRLVETHRKRIDNGERSVLVGLQSFAEGLDLKGDYLTQVHIHKIAFPPIDS 620

Query: 640 PVEAALAEWIEARGGNPFMEIAVPDASLRLVQACGRLLRTEEDRGTITLLDRRVVTQRYG 699
           PV     EW+++    PF   ++P AS  L+Q  GRL+R+    G + + D+R++T+ YG
Sbjct: 621 PVVITEGEWLKSLNRYPFEVQSLPAASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYG 680

Query: 700 KAILNALPPF 709
           + +LNALP F
Sbjct: 681 QRLLNALPIF 690