Pairwise Alignments

Query, 714 a.a., Helicase c2 from Pseudomonas syringae pv. syringae B728a

Subject, 761 a.a., putative ATP-dependent helicase DinG from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  316 bits (810), Expect = 2e-90
 Identities = 243/735 (33%), Positives = 354/735 (48%), Gaps = 74/735 (10%)

Query: 2   ISTELKTQIQGAYSRFLEA-KSLKPRYGQRLMIAEVAKVLGDIDTDEEGRRSGDPAVVAV 60
           ++  LK QI   Y    E      PR  QR MIA+VAK L      EEGR       +A+
Sbjct: 48  LTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAG----EEGRH------LAI 97

Query: 61  EAGTGTGKTVAYAIASIPTAKAAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFTFAL 120
           EA TG GKT++Y I  I  A+   K LV++TA VALQ+QI  KDLP L++    +  F  
Sbjct: 98  EAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLP-LLKKIIPDLKFTA 156

Query: 121 AKGRGRYMCLSKLDALLQESDATNATAQLFEEEGFKIEVDEASQKLFTSMLQKLAGNKWD 180
           A GRGRY+C   L AL              ++E      +E  QK    +   L   KWD
Sbjct: 157 AFGRGRYVCPRNLTALASTVPTQQDLLAFLDDELTPNNQEE--QKRCAKLKGDLDTYKWD 214

Query: 181 GDRDSWPQELADQDWARLTTDHSQCTNRHCPNFQQCAFYKAREGMGKVDVIVTNHDMVLA 240
           G RD     + D  W RL+TD + C NR+C  +++C F+ AR  + + +V+V NH +V+A
Sbjct: 215 GLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMA 274

Query: 241 DLALGGGAVLPDPRDTLYVFDEGHHLPDKAIGHFAHYTRLKSTADWLEQTAKNLAKLLAQ 300
             A+   AVLPDP++ L V DEGHHLPD  +   A     + TA W         KL+A 
Sbjct: 275 --AMESEAVLPDPKNLLLVLDEGHHLPD--VARDALEMSAEITAPWYRLQLDLFTKLVAT 330

Query: 301 HPLPGDLGKLIEQ-----VPELA--REIKGHQQFMFGACEQLADFRAGED------MQGR 347
                     +EQ     +P LA    +  H       CE+L +  A  +      M   
Sbjct: 331 ---------CMEQFRPKTIPPLAIPERLNAH-------CEELYELIASLNNILNLYMPAG 374

Query: 348 ERPRHRFVGGVIPEHIREMGIELKKGFARLDDLFTRLTELLKEGMDGEVNIGIASHQAEE 407
           +   HRF  G +P+ +    +E+ +  A+L ++   L EL    +  +      SH    
Sbjct: 375 QEAEHRFAMGELPDEV----LEICQRLAKLTEMLRGLAELFLNDLSEKTG----SHDIVR 426

Query: 408 WYPLFGSLLARAHGNWE----LWTAFTAEDPEDSPPMARWLTLADSGAMFDIEVNASPIL 463
            + L   +  RA G +E    LW   +      +P + +W T  +      +  +   I 
Sbjct: 427 LHRLILQM-NRALGMFEAQSKLWRLASLAQSSGAP-VTKWATREEREGQLHLWFHCVGIR 484

Query: 464 AAEMLRRNLWNIAYGALVTSATLTALGKFDRYRMRAGLPKGAVTAVVP--SPFHHADAGV 521
            ++ L R LW      +VTSATL +L  F R +  +GL + A    V   SPF+H + G 
Sbjct: 485 VSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGK 544

Query: 522 LRVPDLKADP-----RDSVAHTAAIIRDLPGLVEGSR--GTLVLYSSRKQMQDVFDGLDR 574
           + +P ++ +P        +A  AA  R     VE  +  G LVL++S + MQ   D +  
Sbjct: 545 IVIPRMRVEPSIDNEEQHIAEMAAFFRKQ---VESKKHLGMLVLFASGRAMQRFLDYVT- 600

Query: 575 DWRKQVFIQGNLSKQETLNKHKARVDSGESSVLFGLASFAEGVDLPGAYCEHVVIAKIPF 634
           D R  + +QG+  +   +  H+ RV +GE SVL GL SFAEG+DL G     V I KI F
Sbjct: 601 DLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAF 660

Query: 635 AVPDDPVEAALAEWIEARGGNPFMEIAVPDASLRLVQACGRLLRTEEDRGTITLLDRRVV 694
              D PV     EW+++    PF   ++P AS  L+Q  GRL+R+    G + + D+R++
Sbjct: 661 PPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLL 720

Query: 695 TQRYGKAILNALPPF 709
           T+ YGK +L+ALP F
Sbjct: 721 TKNYGKRLLDALPVF 735