Pairwise Alignments

Query, 714 a.a., Helicase c2 from Pseudomonas syringae pv. syringae B728a

Subject, 716 a.a., ATP-dependent DNA helicase DinG from Escherichia coli ECRC98

 Score =  318 bits (815), Expect = 6e-91
 Identities = 243/735 (33%), Positives = 355/735 (48%), Gaps = 74/735 (10%)

Query: 2   ISTELKTQIQGAYSRFLEA-KSLKPRYGQRLMIAEVAKVLGDIDTDEEGRRSGDPAVVAV 60
           ++  LK QI   Y    E      PR  QR MIA+VAK L      EEGR       +A+
Sbjct: 3   LTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAG----EEGRH------LAI 52

Query: 61  EAGTGTGKTVAYAIASIPTAKAAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFTFAL 120
           EA TG GKT++Y I  I  A+   K LV++TA VALQ+QI  KDLP L++    +  F  
Sbjct: 53  EAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLP-LLKKIIPDLKFTA 111

Query: 121 AKGRGRYMCLSKLDALLQESDATNATAQLFEEEGFKIEVDEASQKLFTSMLQKLAGNKWD 180
           A GRGRY+C   L AL              ++E      +E  QK    +   L   KWD
Sbjct: 112 AFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEE--QKRCAKLKGDLDTYKWD 169

Query: 181 GDRDSWPQELADQDWARLTTDHSQCTNRHCPNFQQCAFYKAREGMGKVDVIVTNHDMVLA 240
           G RD     + D  W RL+TD + C NR+C  +++C F+ AR  + + +V+V NH +V+A
Sbjct: 170 GLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMA 229

Query: 241 DLALGGGAVLPDPRDTLYVFDEGHHLPDKAIGHFAHYTRLKSTADWLEQTAKNLAKLLAQ 300
             A+   AVLPDP++ L V DEGHHLPD  +   A     + TA W         KL+A 
Sbjct: 230 --AMESEAVLPDPKNLLLVLDEGHHLPD--VARDALEMSAEITAPWYRLQLDLFTKLVAT 285

Query: 301 HPLPGDLGKLIEQ-----VPELA--REIKGHQQFMFGACEQLADFRAGED------MQGR 347
                     +EQ     +P LA    +  H       CE+L +  A  +      M   
Sbjct: 286 ---------CMEQFRPKTIPPLAIPERLNAH-------CEELYELIASLNNILNLYMPAG 329

Query: 348 ERPRHRFVGGVIPEHIREMGIELKKGFARLDDLFTRLTELLKEGMDGEVNIGIASHQAEE 407
           +   HRF  G +P+ +    +E+ +  A+L ++   L EL    +  +      SH    
Sbjct: 330 QEAEHRFAMGELPDEV----LEICQRLAKLTEMLRGLAELFLNDLSEKTG----SHDIVR 381

Query: 408 WYPLFGSLLARAHGNWE----LWTAFTAEDPEDSPPMARWLTLADSGAMFDIEVNASPIL 463
            + L   +  RA G +E    LW   +      +P + +W T  +      +  +   I 
Sbjct: 382 LHRLILQM-NRALGMFEAQSKLWRLASLAQSSGAP-VTKWATREEREGQLHLWFHCVGIR 439

Query: 464 AAEMLRRNLWNIAYGALVTSATLTALGKFDRYRMRAGLPKGAVTAVVP--SPFHHADAGV 521
            ++ L R LW      +VTSATL +L  F R +  +GL + A    V   SPF+H + G 
Sbjct: 440 VSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGK 499

Query: 522 LRVPDLKADP-----RDSVAHTAAIIRDLPGLVEGSR--GTLVLYSSRKQMQDVFDGLDR 574
           + +P ++ +P        +A  AA  R+    VE  +  G LVL++S + MQ   D +  
Sbjct: 500 IVIPRMRVEPSIDNEEQHIAEMAAFFREQ---VESKKHLGMLVLFASGRAMQRFLDYVT- 555

Query: 575 DWRKQVFIQGNLSKQETLNKHKARVDSGESSVLFGLASFAEGVDLPGAYCEHVVIAKIPF 634
           D R  + +QG+  +   +  H+ RV +GE SVL GL SFAEG+DL G     V I KI F
Sbjct: 556 DLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDMLSQVHIHKIAF 615

Query: 635 AVPDDPVEAALAEWIEARGGNPFMEIAVPDASLRLVQACGRLLRTEEDRGTITLLDRRVV 694
              D PV     EW+++    PF   ++P AS  L+Q  GRL+R+    G + + D+R++
Sbjct: 616 PPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLL 675

Query: 695 TQRYGKAILNALPPF 709
           T+ YGK +L+ALP F
Sbjct: 676 TKNYGKRLLDALPVF 690