Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase and ligase from Pseudomonas syringae pv. syringae B728a

Subject, 562 a.a., Long-chain-fatty-acid--CoA ligase from Pseudomonas sp. RS175

 Score =  681 bits (1756), Expect = 0.0
 Identities = 334/562 (59%), Positives = 423/562 (75%), Gaps = 11/562 (1%)

Query: 1   MIDNFWKDKYPSGIPADINPDEYPNVQAVLKQSCQRFADKPAFSNLGKTITYGELYELSG 60
           M  +FW DK P+G+P+DI+   Y +V  V ++SC++FAD+PAFSN+G T+TY EL   S 
Sbjct: 1   MQPDFWNDKRPAGVPSDIDLGAYKSVIEVFERSCKKFADRPAFSNMGVTLTYAELERYSA 60

Query: 61  AFAAWIQQHTDLQPGDRIAVQLPNVLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFND 120
           AFA ++Q HTDL PGDRIAVQ+PNVLQYPIAVFGA+RAGLIVVNTNPLYT REM HQF D
Sbjct: 61  AFAGYLQAHTDLAPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNTNPLYTPREMRHQFKD 120

Query: 121 SGAKALVCLANMAHLAEKVVPRTQIRQVIVTEVADMLSPFKRLLINSVIKYVKKMVPAYH 180
           SGA+ALV +       ++V+P T ++ +I  ++ D++   K  L+N+V+  VKKMVPAY 
Sbjct: 121 SGARALVYMNLFGQKVQEVLPDTDLQYLIEAKMGDLMPAAKGWLVNTVVSKVKKMVPAYS 180

Query: 181 LPKAIKFNDVLGKGRGQPVTDVSPGSVDVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCR 240
           LP+AI F   L  GRGQ +  +     D+AVLQYTGGTTG+AKGAMLTH NL+ANM Q R
Sbjct: 181 LPQAISFKSALRLGRGQGIRPLKVSLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQAR 240

Query: 241 ALMAS-------NLDEGCEIIITPLPLYHIYAFTFHCMAMMLLGNHNILISNPRDLPAMV 293
           A +          L EG E++I PLPLYHIYAFT +CM MM+ GNHN+LI+NPRD+   +
Sbjct: 241 ACLGQFGDDGHPLLREGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIGGFI 300

Query: 294 KELSKWKFSGFVGLNTLFVALCNSDGFRNLDFSALKVTLSGGMALQQAAAERWKQVTGCQ 353
           KEL  W+FS  +GLNTLFVAL +   F++LDFS+LK+T SGG AL +A AERW+Q+TGC+
Sbjct: 301 KELKNWRFSALLGLNTLFVALMDHPDFKSLDFSSLKLTNSGGTALVKATAERWEQLTGCR 360

Query: 354 VCEGYGMTETSPVATVNP-SQYVQMGSIGIPVPSTLCKVIDDAGNELAFGETGELCIKGP 412
           + EGYG+TETSPVA  NP     ++G++G+PVP TL KVI D G E   GE GELCIKGP
Sbjct: 361 ITEGYGLTETSPVACTNPYGSKSRLGTVGLPVPGTLMKVISDEGVEQPLGERGELCIKGP 420

Query: 413 QVMKGYWQRQEATDEMIDSEGWLKTGDIAIIQPDGYIRIVDRKKDMILISGFNVYPNELE 472
           Q+MKGYW + EAT E++D EGW K+GDIA+I PDG++RIVDRKKDMI++SGFNVYPNE+E
Sbjct: 421 QIMKGYWNKPEATAEVLDDEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE 480

Query: 473 DVLATLPGVLQCAAIGVPDEKSGETIKVFVVAK-PGVTLTKEQVMAHMRANLTGYKVPRS 531
           DV+   P V  CA IGVPDE+SGE +K+FVVA+  GV+L  E++ A+ + N TGYK+P+ 
Sbjct: 481 DVVMAHPKVASCAVIGVPDERSGEAVKLFVVAREAGVSL--EELKAYCKENFTGYKIPKH 538

Query: 532 VEFRDVLPTTNVGKILRRELRD 553
           +  RD LP T VGKILRRELRD
Sbjct: 539 IVLRDSLPMTPVGKILRRELRD 560