Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase and ligase from Pseudomonas syringae pv. syringae B728a

Subject, 562 a.a., Long-chain-fatty-acid--CoA ligase from Pseudomonas sp. DMC3

 Score =  672 bits (1733), Expect = 0.0
 Identities = 331/562 (58%), Positives = 422/562 (75%), Gaps = 11/562 (1%)

Query: 1   MIDNFWKDKYPSGIPADINPDEYPNVQAVLKQSCQRFADKPAFSNLGKTITYGELYELSG 60
           M  +FW DK P+G+P DI+  E+ +V  V ++SC++FAD+PAFS++G T+TY EL   S 
Sbjct: 1   MQPDFWNDKRPAGVPLDIDMGEFKSVIEVFERSCKKFADRPAFSSMGITLTYAELERQSA 60

Query: 61  AFAAWIQQHTDLQPGDRIAVQLPNVLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFND 120
           AFA ++Q HTDL PGDRIAVQ+PNVL YPIAVFGA+RAGLIVVNTNPLYT REM HQF D
Sbjct: 61  AFAGYLQAHTDLVPGDRIAVQMPNVLHYPIAVFGALRAGLIVVNTNPLYTPREMRHQFKD 120

Query: 121 SGAKALVCLANMAHLAEKVVPRTQIRQVIVTEVADMLSPFKRLLINSVIKYVKKMVPAYH 180
           SGA+ALV L       ++V+P T I+ +I  ++ D++   K  L+N+V+  VKK+VP Y 
Sbjct: 121 SGARALVYLNLFGQKVQEVLPDTDIQYLIEAKMGDLMPTAKGWLVNTVVSKVKKLVPEYS 180

Query: 181 LPKAIKFNDVLGKGRGQPVTDVSPGSVDVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCR 240
           LP+A  F   L  GRG  +  ++ G  D+AVLQYTGGTTG+AKGAMLTH NL+ANM Q R
Sbjct: 181 LPQATSFKSALRMGRGLGIKPLNVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQVR 240

Query: 241 ALMAS-------NLDEGCEIIITPLPLYHIYAFTFHCMAMMLLGNHNILISNPRDLPAMV 293
           A +A         L EG E++I PLPLYHIYAFT +CM MM+ GNHN+LISNPRD+   +
Sbjct: 241 ACLAQLGPDGQPLLREGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLISNPRDIAGFI 300

Query: 294 KELSKWKFSGFVGLNTLFVALCNSDGFRNLDFSALKVTLSGGMALQQAAAERWKQVTGCQ 353
           KEL  W+FS  +GLNTLFVAL +   F+ LDFS+LK+T SGG AL +A AERW+Q+TGC+
Sbjct: 301 KELKNWRFSALLGLNTLFVALMDHPDFKTLDFSSLKLTNSGGTALVKATAERWEQMTGCR 360

Query: 354 VCEGYGMTETSPVATVNP-SQYVQMGSIGIPVPSTLCKVIDDAGNELAFGETGELCIKGP 412
           + EGYG+TETSPVA  NP     ++G++G+PVP TL K+I+D G E   GE GELCIKGP
Sbjct: 361 ITEGYGLTETSPVACTNPYGDQSRLGTVGLPVPGTLVKIINDDGVEQPLGERGELCIKGP 420

Query: 413 QVMKGYWQRQEATDEMIDSEGWLKTGDIAIIQPDGYIRIVDRKKDMILISGFNVYPNELE 472
           Q+MKGYW + EAT E++D+EGW K+GDIA+I PDG++RIVDRKKDMI++SGFNVYPNE+E
Sbjct: 421 QIMKGYWNKPEATAEVLDAEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE 480

Query: 473 DVLATLPGVLQCAAIGVPDEKSGETIKVFVVAK-PGVTLTKEQVMAHMRANLTGYKVPRS 531
           DV+   P V  CA IGVPDE+SGE +K+FVVA+  GV+L  E++ A+ + N T YKVP+ 
Sbjct: 481 DVVMAHPKVANCAVIGVPDERSGEAVKLFVVARESGVSL--EELKAYCKENFTAYKVPKH 538

Query: 532 VEFRDVLPTTNVGKILRRELRD 553
           +  R+ LP T VGKILRRELRD
Sbjct: 539 IVLRESLPMTPVGKILRRELRD 560