Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase and ligase from Pseudomonas syringae pv. syringae B728a

Subject, 583 a.a., Long-chain-fatty-acid--CoA ligase from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  621 bits (1601), Expect = 0.0
 Identities = 304/558 (54%), Positives = 405/558 (72%), Gaps = 3/558 (0%)

Query: 6   WKDKYPSGIPADINPDEYPNVQAVLKQSCQRFADKPAFSNLGKTITYGELYELSGAFAAW 65
           W ++YP+ +P +INPD Y ++  + +QS  R+AD+PAF N+G+ +T+ +L E S AFAA+
Sbjct: 27  WLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTFRKLEERSRAFAAY 86

Query: 66  IQQHTDLQPGDRIAVQLPNVLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125
           +QQ   L+ GDR+A+ +PN+LQYP+A+FG +RAG+IVVN NPLYT RE+EHQ NDSGA A
Sbjct: 87  LQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGASA 146

Query: 126 LVCLANMAHLAEKVVPRTQIRQVIVTEVADMLSPFKRLLINSVIKYVKKMVPAYHLPKAI 185
           +V ++N AH  EKVV +T ++ VI+T + D LS  K  ++N V+KY+K++VP YHLP AI
Sbjct: 147 IVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHLPDAI 206

Query: 186 KFNDVLGKGRGQPVTDVSPGSVDVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCRALMAS 245
            F   L  G             D+A LQYTGGTTGVAKGAMLTHRN++AN+ Q  A    
Sbjct: 207 SFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNATYGP 266

Query: 246 NLDEGCEIIITPLPLYHIYAFTFHCMAMMLLGNHNILISNPRDLPAMVKELSKWKFSGFV 305
            L  G E+++T LPLYHI+A T +C+  + LG  N+LI+NPRD+P +VKEL+K+ F+   
Sbjct: 267 LLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAKYPFTAIT 326

Query: 306 GLNTLFVALCNSDGFRNLDFSALKVTLSGGMALQQAAAERWKQVTGCQVCEGYGMTETSP 365
           G+NTLF AL N+  F+ LDFS+L ++  GGM +QQ  AERW ++TG  + EGYG+TE +P
Sbjct: 327 GVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLTECAP 386

Query: 366 VATVNPSQY-VQMGSIGIPVPSTLCKVIDDAGNELAFGETGELCIKGPQVMKGYWQRQEA 424
           + +VNP       GSIG+PVPST  K++DD  NE+  G+ GELC+KGPQVM GYWQR +A
Sbjct: 387 LVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQRPDA 446

Query: 425 TDEMIDSEGWLKTGDIAIIQPDGYIRIVDRKKDMILISGFNVYPNELEDVLATLPGVLQC 484
           TDE+I   GWL TGDIA++  +G++RIVDRKKDMIL+SGFNVYPNE+EDV+   PGV + 
Sbjct: 447 TDEII-KNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEV 505

Query: 485 AAIGVPDEKSGETIKVFVVAKPGVTLTKEQVMAHMRANLTGYKVPRSVEFRDVLPTTNVG 544
           AA+GVP   SGE +K+FVV K   +LT+E ++   R  LTGYKVP+ VEFRD LP +NVG
Sbjct: 506 AAVGVPSGSSGEAVKIFVV-KKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVG 564

Query: 545 KILRRELRDEELKKLGVK 562
           KILRRELRDE   K+  K
Sbjct: 565 KILRRELRDEARGKVDNK 582