Pairwise Alignments

Query, 416 a.a., ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

Subject, 456 a.a., sensor histidine kinase from Pseudomonas sp. SVBP6

 Score =  150 bits (380), Expect = 6e-41
 Identities = 140/451 (31%), Positives = 214/451 (47%), Gaps = 47/451 (10%)

Query: 3   PNR--LFWKLFLAFWLATSLTFMVGA----GLFMFTQSGRGDPSFSTVLDNEVRILQRSG 56
           PNR  LFWKL  A  L      M+G     G  M TQ+          L       +++ 
Sbjct: 12  PNRHSLFWKL--AILLVGFCLLMIGLSWTWGRHMETQNAFLSDQAKGTLQGYASEAEQAW 69

Query: 57  IAAGQALLDAW----QPEGQGRVGLYDNQGLLLAGEAL---ENPRF------ELAVHTRE 103
              GQA +DAW    + +  G VG+       L+   L   EN R       +  V  R 
Sbjct: 70  ARGGQAGIDAWLAAVRDKESGWVGVIGPDLQSLSSTPLNEVENRRLTFLRGIDWPVSPRS 129

Query: 104 GALVHIRS--TQRPNHD----DQPSHLNP--------LITGTVMSALFSWFLS----SYL 145
             +  +R   T++P+      + P  L P        ++T  ++  LF+  L       L
Sbjct: 130 IGMPWMRLPFTEQPHLGTLVIELPQRLAPGQYRVLWRVVTNGIIPGLFTLLLCVGLYRML 189

Query: 146 VAPLMKLREAMGKVARGRFDTRVKPDMGRRRDEIVDLAEDCDRMANQLKVMADSQQQLLH 205
           + PL++LRE        +   RV      R+DE+ +L    D MA +L+     QQQLL 
Sbjct: 190 IVPLIQLREQANAWRADQLSARVASSTTSRQDELGELGRAFDDMAERLQGTVALQQQLLR 249

Query: 206 DISHELRSPLTRMSAAIGLLRQEPTQLDMLERIERESERMDSLIEELLTLARMQSDVESL 265
           D+SHELR+PL+R+  A      E     + ER+ RE + M  L+E+ L LA + ++   L
Sbjct: 250 DLSHELRTPLSRLRVACD---SEADAQHLRERLGREIDCMQRLVEDTLQLAWLDTERAPL 306

Query: 266 TREKVDVISLLAAIVEDAEFEAGLKQCWVRLQAPGSFVAQVDSELLYRAFENVIRNAVRH 325
           ++E + V +L   + EDA +E+G     +      S   Q +   L +A EN++RNA+RH
Sbjct: 307 SKEPIQVQALWDMLAEDACYESGWPAAQLHCALEASCWVQGNLNSLAQALENILRNAIRH 366

Query: 326 TAVGTDVVVVANVQAQPLCLMVNVIDQGPGVDEACLQRIFQPFER--GPENAAQGFGLGL 383
           +  G+  V+  + + Q    ++ + DQG GV ++ L+RIF PF R  G      GFGLGL
Sbjct: 367 SPAGS--VIRLDGRRQGDHWLIWLQDQGGGVAQSELERIFAPFTRLDGSRPGDGGFGLGL 424

Query: 384 AIALRAIEMHGGQIAARNRPGGGLVVDVLLP 414
           +IA  AI   GG++ A+N  G GL +++ LP
Sbjct: 425 SIARNAIVRQGGRLWAQN-TGQGLRLNMQLP 454