Pairwise Alignments

Query, 278 a.a., RNA binding S1 from Pseudomonas syringae pv. syringae B728a

Subject, 278 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  423 bits (1087), Expect = e-123
 Identities = 207/276 (75%), Positives = 232/276 (84%)

Query: 1   MALIGRYNSLQIVKHTNFGLYLDGAQDGEILLPNRYIPKDVPTEDEDWLNVFIYLDSEDK 60
           MAL+GRYNSLQIVKH +FGLYLDG  DGEILLP RYIPK+  TE +DWLNVFIYLDSED+
Sbjct: 1   MALLGRYNSLQIVKHVDFGLYLDGGADGEILLPGRYIPKNAETEVDDWLNVFIYLDSEDQ 60

Query: 61  LLATTEKPKVQVGEFASLKVVEVNSIGVFLDWGLPKDLLLPYSEEKRTLQAGDYCVVHVY 120
           L+ATTEKPKVQVGEFASLKV ++N  G+FLDWGL KDLL+PYSEE R L+ GDYCVVHVY
Sbjct: 61  LIATTEKPKVQVGEFASLKVKDINGAGIFLDWGLSKDLLMPYSEEARPLKIGDYCVVHVY 120

Query: 121 LDKHTRRITATARLDRYLDKTPANYSVGQEVDLLVAEATDMGFKAIINNKHWGLIHKNEV 180
           LDK TRRITAT+RLDRYLD TPA+Y VGQ V+LLVA  T MGFKAIINN+HWGLIHKNEV
Sbjct: 121 LDKRTRRITATSRLDRYLDVTPADYKVGQPVELLVAGETPMGFKAIINNRHWGLIHKNEV 180

Query: 181 FKFMRAGKQEKGYIKEIRSDGNISLSLQPVGAEAASSLNSKILTKLRENNGTLPVSDKSD 240
           FKF+R+G  EKG+IKE+R DG ISLSLQPVGA  A +L  +I+ +L    G L V DKSD
Sbjct: 181 FKFLRSGMHEKGFIKEVRQDGKISLSLQPVGAALADTLQEQIMARLEAEGGVLGVCDKSD 240

Query: 241 PQVISGLFGVSKGNFKKAIGALYKQGQIVIHADRIE 276
           P +IS LF VSKGNFKKAIG L+KQG IVIH DRIE
Sbjct: 241 PALISKLFNVSKGNFKKAIGGLFKQGLIVIHDDRIE 276