Pairwise Alignments

Query, 308 a.a., Response regulator receiver:CheW-like protein from Pseudomonas syringae pv. syringae B728a

Subject, 309 a.a., chemotaxis protein CheV from Pseudomonas sp. SVBP6

 Score =  524 bits (1350), Expect = e-154
 Identities = 269/307 (87%), Positives = 285/307 (92%), Gaps = 1/307 (0%)

Query: 1   MAGVMDSVNQRTQLVGQNRLELLLFRLDGKQLYGINVFKVKEVLQCPKLTIMPKSSKIVR 60
           MAGVMDSVNQRTQLVGQNRLELLLFRL+G+QLYGINVFKV+EVLQCP LT+MPKSS +VR
Sbjct: 1   MAGVMDSVNQRTQLVGQNRLELLLFRLNGEQLYGINVFKVREVLQCPNLTVMPKSSPVVR 60

Query: 61  GVANIRGGTIPIMDLAMATGSTGMISLVN-SFVIITEYNTKVQGFLVHSVERIVNMNWEE 119
           GVANIRG TIPI+DLAMATG  G+    + SFVIITEYNTK QGFLVHSVERIVNMNWEE
Sbjct: 61  GVANIRGATIPILDLAMATGMPGLSEETSKSFVIITEYNTKTQGFLVHSVERIVNMNWEE 120

Query: 120 IHPPPKGTGRDHYLTAVTRVDNQLVEIIDVEKILAEVAPVSEEISVGVIDAEVQHKAVSL 179
           IHPPPKGTGRDHYLTAVTRVDN++VEIIDVEKILAEVAP SE IS GV+DAEVQ KAV L
Sbjct: 121 IHPPPKGTGRDHYLTAVTRVDNKMVEIIDVEKILAEVAPTSEAISAGVVDAEVQDKAVML 180

Query: 180 RVLTVDDSSVARKQVSRCLETVGVEVVALNDGRQALDYLLKMVAEGKKPEEEFLMMISDI 239
           RVLTVDDSSVARKQVSRCL+TVGVEVVALNDGRQALDYL K+V EGK+PEEEFLMMISDI
Sbjct: 181 RVLTVDDSSVARKQVSRCLQTVGVEVVALNDGRQALDYLRKLVDEGKRPEEEFLMMISDI 240

Query: 240 EMPEMDGYTLTAAIRNDPRMQKMHITLHTSLSGVFNQAMVKKVGADDFLAKFRPDDLAAR 299
           EMPEMDGYTLTA IR+DPRMQK+HI LHTSLSGVFNQAMVKKVGADDFLAKFRPDDLA R
Sbjct: 241 EMPEMDGYTLTAEIRSDPRMQKLHIILHTSLSGVFNQAMVKKVGADDFLAKFRPDDLAQR 300

Query: 300 VVARIKA 306
           VV RIKA
Sbjct: 301 VVDRIKA 307