Pairwise Alignments

Query, 686 a.a., Flagellar basal body rod protein:Protein of unknown function DUF1078 from Pseudomonas syringae pv. syringae B728a

Subject, 624 a.a., flagellar hook-associated protein FlgK from Rhodanobacter sp000427505 FW510-R12

 Score =  314 bits (805), Expect = 7e-90
 Identities = 216/688 (31%), Positives = 353/688 (51%), Gaps = 69/688 (10%)

Query: 1   MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVLTTASAQIALGQGVGYIGTGTT 60
           + ++S G+SG+ A+   + T+ +N AN +T GYSRQQV  + SA++  GQ   Y+GTG  
Sbjct: 2   VDMLSTGVSGLLAAQIGLGTVSHNVANANTDGYSRQQV--SFSARLPEGQANYYVGTGVN 59

Query: 61  LSDVRRIYNSYLDTQLQSSTALSADALAYSGQASKTDTLLSDSATGISVQLADFFTKMQG 120
              V+R Y+ +L++ L S+T+    A + +    + +  LS S + +   L  FF  +Q 
Sbjct: 60  TVAVQRAYSQFLNSSLWSATSAQGRAGSMASLTGQLNDQLSGS-SNLQTSLDSFFGAVQD 118

Query: 121 IATSATQSAERSSFLTQAGALSARFNSVSSQLSTQNDNVNTQLDTFTKKVNELTTTLASL 180
           +A + + +A R   L +AG L++ F ++S Q +  +  V  Q+      +N  + ++A L
Sbjct: 119 MANAPSDAASRQVLLARAGGLASTFRALSGQFNQLSGQVQQQIGEAVDAINSDSRSIAKL 178

Query: 181 NKQITQASAGNATPNT-LLDSRSEAVRQLNELVGVKVVENNGN-FDIYTGTGQSLVSGGT 238
           N  I  + A + TP   LLD R   V++L   VG+ VV  N N   ++ G GQ+LV+G  
Sbjct: 179 NGLIRSSQATDGTPPADLLDQRDALVKKLAGQVGISVVPQNDNTISVFVGNGQALVTGTE 238

Query: 239 SYKMSASPSPSDPLQYNVQIAYGQTQTDVTSVLTGGSIGGLLRYRNEVLVPATNELGRTA 298
           ++ +  +P+  D  +  +++    +   ++  + GG++G LL +R  VL PA N+LGR+A
Sbjct: 239 AHALGTAPNAYDATR--LEVVGAASGAVLSGRIGGGTLGALLDFRGNVLDPAQNQLGRSA 296

Query: 299 MVLSDQVNSQMNQGIDSKGNFGSNLYSSINSADAITQRSIGKTTNSVGSGNLNVTIGDTS 358
             L+   N+Q  QG+D +G  G + +        +   ++     + GSG L+  IGD  
Sbjct: 297 QALASAFNAQHAQGMDLRGKLGGSFFD-------VAGPAVQAAATNSGSGTLSAGIGDIG 349

Query: 359 KLTANDYEVTFSDSSNFSVRRLPNGESVGSGSLADNPPKQFEGFSVSLNGNTLAAGDSFK 418
            LT  DY ++++ SS +S+R         +GS  +  P    G S+ + G+  +AGDSF+
Sbjct: 350 ALTGKDYVLSYNGSS-WSMRDTSGNSVALAGSGTNAAPFTAAGLSLVVGGSA-SAGDSFR 407

Query: 419 VIPTRTGASGISVALTDAKDIAAAAPLTATAGSSNSGTGGFTQPVVNTKSDIYDSTQTAD 478
           V P+R  A+  SVA+ D   +AAAAPL   A + N+GT   T  V N             
Sbjct: 408 VQPSRNAAASFSVAIDDPDKVAAAAPLKVAAAAGNTGTASPTVSVSN------------- 454

Query: 479 LRNALKDSTPMKLVMGAVNSSGVQSYTVIKANGGAVLDQNGNAIGGSIIQGQANTVKLNV 538
                  S P      +V  +   SY++    G A +   G  I             ++ 
Sbjct: 455 ------GSDPNLFSSSSVVFASATSYSI--DGGPAQVFAPGQTI-------------VHN 493

Query: 539 GYTDTTTTPNSKTAFELQMTISGSPVANDTFSIGLTGGGSSDNRNALAVVGLQTAKTVGV 598
           G++               M + G+P A + FS+        DN NAL    L     +GV
Sbjct: 494 GWS---------------MQLGGAPQAGNRFSVQANSNAQGDNSNALM---LGKVANLGV 535

Query: 599 INGGVGTSLSGSYASTVSVVGTLASQSKNDVTATAAVVSQAKSSRDSVSGVSLDEEASNL 658
           ++GGV TS   +Y+  V  VG+  + +K+D++   AV SQA SS+ SVSGV+LDEEA+NL
Sbjct: 536 LDGGV-TSAGRAYSQLVGQVGSAGALAKDDLSTQTAVYSQAMSSQQSVSGVNLDEEAANL 594

Query: 659 IKYQQYYTASSQIIKAAQTIFSTLINSL 686
           ++YQQ Y AS+Q+I  A +IF  L++++
Sbjct: 595 LRYQQAYQASAQVISTANSIFGALLSAV 622