Pairwise Alignments

Query, 594 a.a., Flagellar FliF M-ring protein from Pseudomonas syringae pv. syringae B728a

Subject, 593 a.a., flagellar basal-body MS-ring/collar protein FliF from Pseudomonas sp. SVBP6

 Score =  962 bits (2486), Expect = 0.0
 Identities = 491/595 (82%), Positives = 536/595 (90%), Gaps = 3/595 (0%)

Query: 1   MAEAAADTVPART-GDSERKPLFGMSFLENLSEMTMLRQIGLMVGLAASVAIGFAVVLWS 59
           MAEA  D VPA++ G + + PLFGMSFLEN+S+M MLRQ+GL+VGLAASVAIGFAVVLWS
Sbjct: 1   MAEAVVDNVPAKSSGSAPKPPLFGMSFLENISQMPMLRQVGLLVGLAASVAIGFAVVLWS 60

Query: 60  QQPDYRPLYGSLAGMDSKQIMDTLTAANINYTVEPNSGALLVKSDDVQRARIQLAQAGVV 119
           QQPDYRPLYGSLAGMD+KQ+MDTL AA+I Y VEPNSGALLVK+DD+ RAR++LA AGV 
Sbjct: 61  QQPDYRPLYGSLAGMDTKQVMDTLAAADIPYNVEPNSGALLVKADDISRARLKLAAAGVA 120

Query: 120 QNDANIGFEILDKDQGLGTSQFMEATRYRRGLEGELARTISALNNVKGARVHLAIPKSSV 179
            +D N+GFEILDK+QGLGTSQFMEATRYRRGLEGELARTIS+LNNVKGARVHLAIPKSSV
Sbjct: 121 PSDGNVGFEILDKEQGLGTSQFMEATRYRRGLEGELARTISSLNNVKGARVHLAIPKSSV 180

Query: 180 FVRDDRKPSASVLVELYAGRSLEPSQVMAIINLVATSVPELSKSQITVVDQKGALLSDQA 239
           FVRD+RKPSASVLVELY GR+LE  QVMAI+NLVATSVPEL+KSQ+TVVDQKG LLSDQA
Sbjct: 181 FVRDERKPSASVLVELYPGRALEAGQVMAIVNLVATSVPELNKSQVTVVDQKGNLLSDQA 240

Query: 240 ENSELTMAGKQFDYSRRMEGMLTQRVQNILQPILGNDRYKAEVSAVVDFSAVESTAESFN 299
           ENSELTMAGKQFDYSRRMEG+LTQRV NILQP+LGNDRYKAEVSA VDFSAVEST+E FN
Sbjct: 241 ENSELTMAGKQFDYSRRMEGLLTQRVHNILQPVLGNDRYKAEVSADVDFSAVESTSEQFN 300

Query: 300 PDQPALRSEQSVNEQRSSSSSSGGVPGALSNQPPGPATAPQTAGGGAAGAAGPIAPGQPL 359
           PDQPALRSEQSVNEQRSSS    GVPGALSNQPPGPA+APQT  GG   AA  I PGQPL
Sbjct: 301 PDQPALRSEQSVNEQRSSSMGPQGVPGALSNQPPGPASAPQTT-GGTQTAASAIQPGQPL 359

Query: 360 LDANGQQIMDPATGQPALAPYPADKRVQSTKNFELDRSISHTKQQQGRLTRLSVAVVVDD 419
           LDANGQQIMDPATGQP LAPYPADKR QSTKNFELDRSISHT+QQQGRLTRLSVAVVVDD
Sbjct: 360 LDANGQQIMDPATGQPMLAPYPADKRQQSTKNFELDRSISHTRQQQGRLTRLSVAVVVDD 419

Query: 420 MVKTNAANGEVTRAPWSAADLARFTRLVQDAVGFDASRGDSVSVINVPFSSERAEVLPEA 479
            +K + A G+  R PW+A DLARFTRLVQDAVGFDASRGDSVSVINVPF+++R EV+ E 
Sbjct: 420 QLKVDPATGDAARTPWAAEDLARFTRLVQDAVGFDASRGDSVSVINVPFAADRGEVISEI 479

Query: 480 SFYSQPWFWDIVKQAVGVIFILILVFGVLRPVLNNITNGKRKELAGFGGDAELGGMGGLD 539
            FYSQPWFWDI+KQ +GV+FIL+LVFGVLRPVLNNIT G  K+ AG  GD ELGGM GLD
Sbjct: 480 PFYSQPWFWDIIKQVMGVLFILVLVFGVLRPVLNNIT-GNGKQGAGADGDMELGGMLGLD 538

Query: 540 GELSNDRVSLGGPQSILLPSPTEGYDAQLNAIKSLVAEDPGRVAQVVKEWINTDE 594
           G+L+NDRVSLGGPQSILLPSP+EGYDAQLNAIKSLVAEDPGRVAQVVKEWIN DE
Sbjct: 539 GDLANDRVSLGGPQSILLPSPSEGYDAQLNAIKSLVAEDPGRVAQVVKEWINADE 593