Pairwise Alignments

Query, 261 a.a., Flagellar biosynthesis protein FliR from Pseudomonas syringae pv. syringae B728a

Subject, 261 a.a., flagellar type III secretion system protein FliR from Pectobacterium carotovorum WPP14

 Score =  175 bits (443), Expect = 1e-48
 Identities = 95/256 (37%), Positives = 149/256 (58%), Gaps = 6/256 (2%)

Query: 4   MLALTDTQISTWVASFMLPLFRIIALLMTMPIIGTTLVPRRVRMYLAVAITVVVAPALPA 63
           ML      +  WV+ F  P  RI+AL+ T P+     +  RV++ L   IT++VAP LP 
Sbjct: 1   MLTFNSWDMVNWVSQFFWPFVRILALISTAPVFNERAIGNRVKIGLGALITLLVAPYLP- 59

Query: 64  MPPVQALDLSALLLIGEQIIIGAGMGLSLQLFFHIFVIAGQIISTQMGMGFASMVDPTNG 123
           +       ++ + L+ +QI+IG  +GLS+QL F     AG++I  QMG+ FA+  DPT G
Sbjct: 60  LNTTPIFSVAGVWLLIQQILIGVTLGLSMQLAFAAIRHAGELIGLQMGLAFATFFDPTGG 119

Query: 124 VSSATIGQFFTMLVTLLFLAMNGHLVVLEVLVESFTTMPVGSGLLVNN-FWELANGLGWV 182
            +   + +F  +L  LLFL  +GHL ++ +L +SF T+P+ +  + ++ F  LA   G +
Sbjct: 120 PNMQVVARFLNILAILLFLTFDGHLWMISLLADSFYTLPISTNPINSHAFLALARAGGLI 179

Query: 183 LASGLRLVLPAITALLIINIAFGVMTRAAPQLNIFSIGFPLTLVLGMVILWMTMGDMLNQ 242
             +GL L LP IT LL IN+A G++ R APQL++F +GFP+TL +G+    MT+G +L  
Sbjct: 180 FINGLMLALPIITLLLTINLALGMLNRVAPQLSVFVVGFPITLTVGI----MTLGLLLPL 235

Query: 243 YQPIATQALQALRDMV 258
             P A      + D++
Sbjct: 236 VPPFAEHLFSEVFDLL 251