Pairwise Alignments

Query, 261 a.a., Flagellar biosynthesis protein FliR from Pseudomonas syringae pv. syringae B728a

Subject, 256 a.a., type III secretion system export apparatus subunit SctT from Erwinia amylovora T8

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 2/215 (0%)

Query: 19  FMLPLFRIIALLMTMPIIGTTLVPRRVRMYLAVAITVVVAPALPAMPPVQALDLSALLLI 78
           F +   R+  +   +PI+G  +    +     + +T++     P    V   + S  LL+
Sbjct: 17  FAIAYVRLAVVFYMLPILGERIFSHLIIKNAIITLTII--GLWPCFETVVIPEQSWYLLL 74

Query: 79  GEQIIIGAGMGLSLQLFFHIFVIAGQIISTQMGMGFASMVDPTNGVSSATIGQFFTMLVT 138
            ++ I+G  +   L L F I +  G+I+  Q G   A  +DP NG  ++ +         
Sbjct: 75  VQESIVGLILATVLCLPFWIVIGLGEILDNQRGASMADNIDPLNGGQNSILSGLLNFTFG 134

Query: 139 LLFLAMNGHLVVLEVLVESFTTMPVGSGLLVNNFWELANGLGWVLASGLRLVLPAITALL 198
           ++F   NG  ++LE   ES+  +P GS     ++ E    L  V+ SG+ L  P I  ++
Sbjct: 135 IIFFINNGMCLMLEAFTESYQFLPPGSRWSGFHWQEAGRVLVIVVESGIMLAAPVIIVMM 194

Query: 199 IINIAFGVMTRAAPQLNIFSIGFPLTLVLGMVILW 233
           I  I  GV  R  PQLN FS+   +   +  +I +
Sbjct: 195 IAEILLGVFARYCPQLNPFSLSLTIKSFITFIIFF 229