Pairwise Alignments

Query, 295 a.a., OmpA/MotB from Pseudomonas syringae pv. syringae B728a

Subject, 295 a.a., flagellar motor protein MotD from Pseudomonas sp. SVBP6

 Score =  483 bits (1242), Expect = e-141
 Identities = 236/293 (80%), Positives = 262/293 (89%)

Query: 1   MARRRQVEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTE 60
           MARRRQ EEHENHERWLVSYADFITLLFAFFVVMYSISS+NEGKYK++SQAL+GVFND E
Sbjct: 1   MARRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALIGVFNDPE 60

Query: 61  RTMKPIPIGEQRPVSIKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120
           R+MKPIPIG++RP+S+KPAEPL+KDSEQ DAG+ QAS DPL+TI  DVRDAFGDLIKSDQ
Sbjct: 61  RSMKPIPIGDERPLSVKPAEPLIKDSEQVDAGLAQASSDPLKTITDDVRDAFGDLIKSDQ 120

Query: 121 MTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEGFTDDQPI 180
           MTVRGNELW+EIELNSS+LFGSGDAMPSD AF IIEKVA I+K F NP+HVEGFTDD PI
Sbjct: 121 MTVRGNELWVEIELNSSLLFGSGDAMPSDVAFNIIEKVARILKPFANPVHVEGFTDDLPI 180

Query: 181 STAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIVPNTSTAGRAKNRRVV 240
            TAQ+PTNWELSSAR+ASIVR+LAM+GVNPAR+ASVGYGEFQPI  N S  GRA+NRRVV
Sbjct: 181 RTAQYPTNWELSSARAASIVRLLAMEGVNPARMASVGYGEFQPIAANDSAEGRARNRRVV 240

Query: 241 LVISRNLDIRRSLTSAGSANVQPDAALRRAGTQTAPVPAKPPVRANAVNSPSP 293
           LVISRNL++RRSLT  GSAN  PDAA++RAGTQTAP    P V  N VNSPSP
Sbjct: 241 LVISRNLEVRRSLTGTGSANATPDAAMKRAGTQTAPAAVAPTVGDNRVNSPSP 293