Pairwise Alignments

Query, 295 a.a., OmpA/MotB from Pseudomonas syringae pv. syringae B728a

Subject, 295 a.a., flagellar motor protein MotD from Pseudomonas fluorescens SBW25

 Score =  458 bits (1179), Expect = e-134
 Identities = 223/292 (76%), Positives = 259/292 (88%), Gaps = 1/292 (0%)

Query: 3   RRRQVEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTERT 62
           RRR+ EEH NHERWLVSYADFITLLFAFFVVMYSISSVNEGKYK++SQAL+GVFND +R 
Sbjct: 4   RRREPEEHVNHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKVISQALIGVFNDADRA 63

Query: 63  MKPIPIGEQRPVSIKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQMT 122
           +KPIPIGE+RP ++ PA+PLV DS++T AG+G  SD PL++IA D+  AFGDLI S+QMT
Sbjct: 64  LKPIPIGEERPKTVTPAKPLVNDSDETAAGVGGTSD-PLKSIADDISAAFGDLISSNQMT 122

Query: 123 VRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEGFTDDQPIST 182
           VRGNELW+EIELNSS+LF S DAMPSD+AFTII+KVA I++ F+NPIHVEGFTD+ PI+T
Sbjct: 123 VRGNELWVEIELNSSLLFASADAMPSDQAFTIIDKVASILRPFENPIHVEGFTDNFPINT 182

Query: 183 AQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIVPNTSTAGRAKNRRVVLV 242
           AQ+PTNWELSSAR+ASIVRMLAM GVNP RLASVGYGEFQP+  N +  GRA+NRRVVLV
Sbjct: 183 AQYPTNWELSSARAASIVRMLAMQGVNPGRLASVGYGEFQPVANNATVEGRARNRRVVLV 242

Query: 243 ISRNLDIRRSLTSAGSANVQPDAALRRAGTQTAPVPAKPPVRANAVNSPSPA 294
           +SRNLD+RRSLT  G+AN  PDAAL+RAGTQTAP PAKPPVR +AVNSPSPA
Sbjct: 243 VSRNLDVRRSLTGTGTANATPDAALKRAGTQTAPAPAKPPVRQSAVNSPSPA 294