Pairwise Alignments

Query, 309 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

Subject, 307 a.a., PCP degradation transcriptional activation protein from Pseudomonas sp. DMC3

 Score =  141 bits (356), Expect = 2e-38
 Identities = 95/294 (32%), Positives = 149/294 (50%), Gaps = 6/294 (2%)

Query: 5   ELRKADINLMVVFETLMQERNVTRAAEKLFLGQPTISAALNRLRSLLNDPLFIRVGHRME 64
           + R+ D+NL+V  E L+ E+NVTRAA +L L QP +SA L+RLR + NDPL I     M 
Sbjct: 2   DTRRLDLNLLVTLEALLIEQNVTRAAARLHLSQPAVSAQLSRLRDVFNDPLLIPAQRGMT 61

Query: 65  PTARAHEILKHLTPALDAMSTALSLTTDFDPSVSKMTFRIGLTDDVEFGLLPAMLKAIRE 124
           PT +A E+L  L  ALD +   ++   +F+P+ + +T  I  TD V+  L+  ++ A+R 
Sbjct: 62  PTVKALELLVPLRQALDQVRATVTTHLNFEPATASLTVSIACTDYVQAVLIKHLVVAMRR 121

Query: 125 EAPGVVIVVKHVDYLNISEVLMSGDITVGVCLTRELPANAKRKTLRNVQPRLV-RADKPA 183
           EAPGV I ++ +D   +   +  G++ + V     +P     + L +    L+ R   P+
Sbjct: 122 EAPGVRIALRVLDVPQLELQMTRGEVDLAVINMNGVPPALHSQHLYDESYVLIGRRGHPS 181

Query: 184 --GPMSLDEYCSRPHVVVS-HVASVSSFADEWLTALGRKRQVVLSVPQFATLPALMAGTD 240
               +++DE+    HVVVS      S+  D  L A G +R VV S   F  +P L+A +D
Sbjct: 182 LRAGLTVDEFAQLEHVVVSLRGGGFSTSVDHALVAHGLRRNVVHSASSFLPVPELVAQSD 241

Query: 241 MISGLSDYAAKAMSALGLLYDEPLPFPTPGLDLSMTWLSVMDSDPAERWLRSRI 294
            ++ +        S   L    PL  P  G  + + W    D     +W+R  I
Sbjct: 242 CVALVPSRLVDGRSEQLLCVAPPL--PVEGFAIGLFWHERSDGHAGFKWVREFI 293