Pairwise Alignments

Query, 340 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

Subject, 345 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  182 bits (462), Expect = 1e-50
 Identities = 126/339 (37%), Positives = 183/339 (53%), Gaps = 20/339 (5%)

Query: 13  VSAVLVLAIMIGAAIGETSISLQVVFQVLANKLWAASYVLDPIDEG--IVWNYRLTRAIV 70
           ++ + VLAI +  A+G  S+ L    +  A +L         +++   I+   RL R ++
Sbjct: 14  LALLCVLAIWLSLALGPVSLPLLDTLKA-ALRLMGLPIEAQGLEQAELILGQIRLPRTLL 72

Query: 71  AAACGAGLAICGVVLQSLLRNPLADPYLLGISAGASTGAVLVAILG---FGA-----GAI 122
             A G  LA+ GV +Q L RNPLADP L+G+S+GA+ GA  VAI+G   FG      G  
Sbjct: 73  GLAVGGVLALSGVAMQGLFRNPLADPGLVGVSSGAALGAA-VAIVGGSFFGGLPDAFGPY 131

Query: 123 SMSAGAFVGAVAAFSLVALLAHSSRGTTAAGQIILAGIAGSQLFNALTSFLITKSASSEQ 182
            +S  AF+G +   +LV  L   + G T    ++LAGIA + L ++    L T  A    
Sbjct: 132 LLSFCAFLGGLGVTALVYRLGRRN-GQTNVATMLLAGIALTALASSAVG-LFTYLADDAT 189

Query: 183 ARGIMFWLLGNLSGVRWHSVWLAVPTVLVGLLVCLW---HRRALDAFTFGSDSAASLGIA 239
            R + FW LG+L+G  +  +W   P +LV   V +W     +AL+A   G   A  LGI 
Sbjct: 190 LRTLTFWNLGSLNGASYSRLW---PLLLVSAGVAMWLPRRAKALNALLLGESEANHLGID 246

Query: 240 VRRVQIILITTAALVTAVMVSIVGSIGFVGLVIPHAVRMLVGVRHARLVPLSALSGALFL 299
           V  ++  L+   AL     V+  G IGFVGLV+PH VR+L G  H  L+P S L+GA  L
Sbjct: 247 VEGLKRELVFCTALGVGAAVAAAGMIGFVGLVVPHLVRLLAGPDHRVLLPASVLAGASLL 306

Query: 300 IAADILSRTLIKGQALPIGVITALIGAPVFALILTRGNS 338
           + AD+++R  +    LPIG++TA IGAP F  +L RG +
Sbjct: 307 LFADLVARLALAPAELPIGIVTAFIGAPFFLYLLLRGRA 345