Pairwise Alignments

Query, 319 a.a., Phage integrase:Phage integrase, N-terminal SAM-like protein from Pseudomonas syringae pv. syringae B728a

Subject, 298 a.a., Tyrosine recombinase XerC from Alteromonas macleodii MIT1002

 Score = 57.0 bits (136), Expect = 6e-13
 Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 30/252 (11%)

Query: 43  ARYLASHAGTLSVNTLKLRLSALAQWHVSQGFVDPTKAPMVRKVIKGIRALHPAQEKQAE 102
           A  +A+     S+N     + ++    V  G     +   +R + K     H       +
Sbjct: 57  ALLIANGWSARSINRAITAIRSIVSVAVMSGLAPEIQLVQLRAISKVSHGAH-----DGK 111

Query: 103 PLQLQDLEKVIAWLEIEIHEAKAQHDQPRLLRGRRDSALILLGFWRGFRSDELCRLQIQD 162
           PL ++ ++ + A+L+           Q   + G R+ A++      G R  EL  L +QD
Sbjct: 112 PLSVKQVQTLFAYLK-----------QNTSVLGIRNYAVLATLLGTGLRRSELVALLLQD 160

Query: 163 VKAIADSGISLYLPRSKGDRDNLGRTYQTPALQRLCPVQAYIEWINCAALVRGPVFRAVD 222
             A    G +L + + KG   N  RT   P   +     A  EW+      +G +F  V 
Sbjct: 161 YVA----GSALIVRKGKG---NKSRTVHLPEWAQ----HALNEWLALRGKHKGYLFHRVA 209

Query: 223 RWGNLSEE-GLHANSVIPLLRQALQRAGIAAEHYTSHSLRRGFASWAHSNGWDLKSLMSY 281
           R GN+  +  L + +V  L+R++L   GI  E  + H LRR F +       DL ++   
Sbjct: 210 RGGNIQHDTHLSSCAVYSLIRKSLSAIGI--ERVSPHDLRRTFITRLLEQNVDLNTVRQM 267

Query: 282 VGWRDIKSAMRY 293
            G  DI + + Y
Sbjct: 268 AGHADISTTIMY 279