Pairwise Alignments

Query, 300 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

Subject, 302 a.a., Transcriptional regulator, LysR family, in formaldehyde detoxification operon from Pseudomonas sp. S08-1

 Score =  184 bits (466), Expect = 3e-51
 Identities = 103/289 (35%), Positives = 160/289 (55%), Gaps = 5/289 (1%)

Query: 4   IDSFQGVITFVVAARSNSFTEAAGRLGISKSAVGKSIARLEARLGVQLFHRSTRRISLTA 63
           + +++G+  FV  A    F  AA RLG+S S V + +ARLE RL  +LF+RSTR+++LT 
Sbjct: 1   MSNWEGLDEFVAVAECGRFAAAAQRLGLSTSQVSRQVARLEERLQTRLFYRSTRKVTLTE 60

Query: 64  DGDAYFIACSNALEEIGAAESGLAPGTREPSGRLRIDIPVAFGRRVVAPLLFEIANKYPA 123
            G  +   C    +    A   +     EP G LR+   VA+G R + PL+ +   ++P 
Sbjct: 61  AGQTFLQHCQRLQDAREEALRAIGDLNDEPKGLLRMTCAVAYGERFIVPLVNQFMARHPQ 120

Query: 124 LQLNMTFSDHLVDPIEEGIDLLVRFGELKDTSGLVARRLARQRWAICAAPSYLARFGVPD 183
           L++ +  S+  +D +   +DL +R G L+D S LVA RLA +   +CAAP+YL R+G P 
Sbjct: 121 LRVEIELSNQTLDLLHSSMDLAIRLGRLQD-SRLVATRLAPRVMHLCAAPAYLERYGRPH 179

Query: 184 TLEDLNRHHCIVGHRRGQPLSWRVNEDQETVRYAPPSAHQIGDGEAMILAAVAGVGLCQM 243
           +L +L RH+C+VG        W   +D   +        +   GEA++ AA+ G GLCQ+
Sbjct: 180 SLSELGRHNCLVGSSD----QWSFQQDGRELSQRVQGNWRCNSGEAVLDAALRGFGLCQL 235

Query: 244 PRCLFKDDIDAGRLVEVLAGYEPEPVEVHAVWPRVSHLRPKVRYVVDEL 292
           P    +  + +G LV++L    P    V A++P+  HL PKVR +V+ L
Sbjct: 236 PDYYVQPHLRSGALVDLLPQQRPPHTAVWALYPQQRHLSPKVRLLVELL 284