Pairwise Alignments

Query, 607 a.a., Excinuclease ABC subunit C from Pseudomonas syringae pv. syringae B728a

Subject, 610 a.a., excinuclease ABC subunit UvrC from Dickeya dadantii 3937

 Score =  615 bits (1587), Expect = e-180
 Identities = 315/607 (51%), Positives = 423/607 (69%), Gaps = 8/607 (1%)

Query: 1   MTQTFDPGAFLATCSGRPGVYRMFDAEATLLYVGKAKNLKKRLASYFRKTGHAPKTGALV 60
           MT+ FD  AFL T + +PGVYRM+DA+ T++YVGKAK+LKKRL+SYFR    + KT ALV
Sbjct: 1   MTERFDAQAFLKTVTSQPGVYRMYDADDTVIYVGKAKDLKKRLSSYFRAQVASRKTEALV 60

Query: 61  SRIAQIETTITGNETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDNAFPRLSIHRG 120
             I QI+ TIT  ETEALLLE   IK ++P YN+LLRDDKSYP +FLS +  PRLS+HRG
Sbjct: 61  KSIRQIDVTITHTETEALLLEHNYIKRYQPRYNVLLRDDKSYPLIFLSGDTHPRLSVHRG 120

Query: 121 TKKAKGRYFGPYPSAGAIRESLSLLQKTFQVRQCEDSYFKNRTRPCLQYQIKRCKGPCV- 179
            K AKG YFGP+P+  A+RE+L LLQK F +RQCE+S ++NR+RPCLQYQI RC GPCV 
Sbjct: 121 AKHAKGEYFGPFPNGNAVRETLMLLQKLFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVN 180

Query: 180 GLVEPEVYAEDVRHSVMFLEGRSNALSDELNASMEKAAMALDFERAAELRDQVALLRRVQ 239
           GLV  E Y   V +  +FL G+   +   L   ME A+  L FE AA +RDQ+  +RRV 
Sbjct: 181 GLVSEEEYQRQVEYVRLFLLGKDQQVLTRLIERMETASRELRFEEAARIRDQIQAVRRVT 240

Query: 240 DQQSMDGGTGDVDVVAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVGEVMSAFL 299
           ++Q + G   D+DV+      G ACVH++ +R G+VLGS+++FP+V    E+ EV+  F+
Sbjct: 241 EKQFVSGDGDDLDVIGVAFEAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELAEVVQTFV 300

Query: 300 AQYFL-GGIDRELPGEVIVNVINDDFPAFVDAVEELRGVEMVISHRVRGTRARWQQMAVT 358
            Q++L G + R LP +++++    +     +++ E  G ++ I  R RG RAR+ ++A T
Sbjct: 301 GQFYLQGSVSRTLPSDILLDFSLPEHQLLAESLTEQAGRKIQIQTRPRGDRARYLKLART 360

Query: 359 NAEQALTARLANRQHVASRFEALAKVLGLEDPPMRLECYDISHSSGEATVASCVVFGPEG 418
           NA  ALT +L+ +  V  R  ALA VLG+E    R+EC+DISH+ GE TVASCVVF  +G
Sbjct: 361 NAHTALTTKLSQQSTVQQRLAALASVLGIE-KINRMECFDISHTMGEQTVASCVVFNADG 419

Query: 419 PIKSDYRRFNIEGVTAGDDYAAMHQALTRRYSRIKAGEGKLPDVLLVDGGKGQMSMARDV 478
           P++S+YRR+NI G+T GDDYAAM+Q L RRY +    EGK+PDV+++DGGKGQ++ A++V
Sbjct: 420 PLRSEYRRYNIAGITPGDDYAAMNQVLRRRYGK-SIDEGKVPDVIVIDGGKGQLAQAKEV 478

Query: 479 LNELQVP----ELILLGVAKGTTRKAGFETLYLNDSAHEFTLPGDSPALHLIQQIRDEAH 534
              LQVP      +LLGVAKG+ RKAG ETL+   +     LP DSPALH+IQ IRD++H
Sbjct: 479 FASLQVPWDKSRPLLLGVAKGSDRKAGLETLFFEATGEGVALPADSPALHVIQHIRDDSH 538

Query: 535 RFAITGHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISK 594
             AI+GHR +R K + TS+LE + GVGP RR+ LLK+ GGLQ L  AS+++IA  PGIS 
Sbjct: 539 NHAISGHRKQRAKVKSTSSLETIEGVGPKRRQMLLKYMGGLQPLMNASVEDIANVPGISH 598

Query: 595 KLAESIY 601
            LAE I+
Sbjct: 599 ALAEKIF 605