Pairwise Alignments

Query, 607 a.a., Excinuclease ABC subunit C from Pseudomonas syringae pv. syringae B728a

Subject, 629 a.a., UvrABC system protein C from Azospirillum sp. SherDot2

 Score =  427 bits (1099), Expect = e-124
 Identities = 248/619 (40%), Positives = 356/619 (57%), Gaps = 26/619 (4%)

Query: 9   AFLATCSGRPGVYRMFDAEATLLYVGKAKNLKKRLASYFRKTGHAPKTGALVSRIAQIET 68
           A L T    PGVYRM  A+ ++LYVGKAKNLK+R+ASY R  G   +T  +VS    +E 
Sbjct: 14  AQLPTLPDTPGVYRMLAADGSVLYVGKAKNLKRRVASYTRTDGLPNRTRRMVSLTRSMEF 73

Query: 69  TITGNETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSD------NAFPRLSIHRGTK 122
             T  E EALLLE  LI+   PP+NIL++DD+S+ Y+ +        + FPRL  HRG+ 
Sbjct: 74  VTTHTEAEALLLEANLIRSLLPPFNILVKDDRSFSYIVIGQSNKRGGHDFPRLMHHRGSA 133

Query: 123 KAKGR----------YFGPYPSAGAIRESLSLLQKTFQVRQCEDSYFKNRTRPCLQYQIK 172
           + +G            FGPY S   +  +++ LQ+ F +R C+D  F +RTRPCLQ+QIK
Sbjct: 134 ERRGTSGKGNRRESDLFGPYASPHLVGMTIAALQRAFLLRTCDDGVFASRTRPCLQHQIK 193

Query: 173 RCKGPCVGLVEPEVYAEDVRHSVMFLEGRSNALSDELNASMEKAAMALDFERAAELRDQV 232
           RC  PCVG V+ E YA  V+     L GRS  +  E    M  ++  L++E AA  RD++
Sbjct: 194 RCSAPCVGRVDEEDYAAQVQGVRDVLSGRSAEVQAEFARHMLDSSDRLEYEDAARWRDRI 253

Query: 233 ALLRRVQDQQ--SMDGGTGDVDVVAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEE 290
             L  +Q +Q  +++   GD DV+A   + G ACV     RGGR  G++ FFP+V  EEE
Sbjct: 254 RALTALQSRQDINLEDTLGDADVLALHRDGGAACVQAFFFRGGRNQGTRAFFPRVDAEEE 313

Query: 291 VGEVMSAFLAQYFLGGIDRELPGEVIVNVINDDFPAFVDAVEELRGVEMVISHRVRGTRA 350
            G++++AF AQ +    D   PG ++++   +      +A+    G  + +    RG + 
Sbjct: 314 PGDILAAFAAQLY---ADTPPPGLLLLSEPVESAELLEEALSLSAGHHVAVECPKRGPKR 370

Query: 351 RWQQMAVTNAEQALTARLANRQHVASRFEALAKVLGLEDPPMRLECYDISHSSGEATVAS 410
           R  + A TNA  AL  RLA R   A+  E +A+V GL D P R+E YD SH  G   V +
Sbjct: 371 RAVEHAQTNARDALGRRLAERSTQATLLEGVARVFGLPDAPRRVEIYDTSHIQGSFPVGA 430

Query: 411 CVVFGPEGPIKSDYRRFNI-EGVTAGDDYAAMHQALTRRYSRIK-AG--EGKLPDVLLVD 466
            VV GPEG  ++ YRRF I +   AG+DYA + +  TRR+ R   AG   G+ PD++L+D
Sbjct: 431 MVVAGPEGFQRNAYRRFYIRDPEAAGNDYAMLRETFTRRFHRSSDAGRDSGQWPDLVLID 490

Query: 467 GGKGQMSMARDVLNELQVPELILLGVAKGTTRKAGFETLYLNDSAHEFTLPGDSPALHLI 526
           GG GQ++  +D L  LQ+ ++ L+ +AKG  R AG E  +        TL  + P LH +
Sbjct: 491 GGLGQLNAVKDELAMLQITDIPLVAIAKGPDRNAGRER-FFRPGQPPLTLEPNDPVLHFL 549

Query: 527 QQIRDEAHRFAITGHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEI 586
           Q++RDEAHR AI  HRARR K    S ++G+ G+GP R++ LL HFG    ++ A + ++
Sbjct: 550 QRLRDEAHRTAIDSHRARRMKAISHSRIDGIPGIGPARKKALLHHFGSATAVASAGLKDL 609

Query: 587 AKAPGISKKLAESIYANLH 605
             APGIS+ +A  +Y + H
Sbjct: 610 EAAPGISEAIARKLYEHFH 628