Pairwise Alignments

Query, 339 a.a., conserved hypothetical protein from Pseudomonas syringae pv. syringae B728a

Subject, 302 a.a., hypothetical protein from Pseudomonas sp. S08-1

 Score = 86.3 bits (212), Expect = 9e-22
 Identities = 78/317 (24%), Positives = 129/317 (40%), Gaps = 74/317 (23%)

Query: 27  ISWSAILAGVVLAMVVSLLLNLLGTAIGSASIDPMQ-EANPLSGIGTGAGIWVVVSSVIS 85
           +SW+AI AG + A  +SL+L LLG  +G +++ P   E     G+G    IW+ ++ +I+
Sbjct: 21  VSWAAIFAGAIAAAALSLILILLGFGLGFSAVSPWSNEGISAEGLGISTIIWLALTQIIA 80

Query: 86  LFVGGWAAGRLAQR-----------EGAFHGLLVWASVSLITVYLVSSAVTGVVRGGLNL 134
             +GG+ AGRL  +               HG L WA  +L+T  ++  +V+G+V  G+  
Sbjct: 81  AGMGGYLAGRLRVKWTTLHGDEVFFRDTAHGFLAWAVATLLTATVLVGSVSGIVGAGVQA 140

Query: 135 AGSGMSALGSGIAQVAPAVGSKIQDQLRAQGIDFNLDDIQGEIETAMRQTGKPELNPDNV 194
           +    + + SG A  A A                  ++  G     + +  +P       
Sbjct: 141 S----AQVASGAAPTALA----------------GAEEEYGYYIDGLFRDDRP------- 173

Query: 195 KQEAQATQQDAQNTAKQSAQNPQQADEQLSGLMDRIKAK---GDQAWDAADRQALVNLIK 251
                                   AD+   G++ RI A+    D     ADR  LV L+ 
Sbjct: 174 ---------------------APSADDAAHGVVARILARNLDNDGELVPADRAYLVQLVS 212

Query: 252 ARGNKTDAEANQIVDQAQASYRQAYAKYQELKAQAEQKAREAAEVTAKRVSQGAWILLIT 311
            R N +  EA   VD+  A  RQ+             +A++AA+   K  +     + + 
Sbjct: 213 QRTNLSPTEAQARVDEIYAQARQSVV-----------QAKQAADEARKAAAHATLWMFVA 261

Query: 312 LVISGLVAAGAGVLGRR 328
           L+I   V + A  LG R
Sbjct: 262 LLIGAFVGSFAATLGGR 278



 Score = 24.6 bits (52), Expect = 0.003
 Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 14/107 (13%)

Query: 1   MIRDDRIAPGAPVYHETHAAGPLLKRISWSAILAGVVLAMVVSLLLNL--LGTAIGSASI 58
           + RDDR AP A        A  L + +     L     A +V L+     L      A +
Sbjct: 167 LFRDDRPAPSADDAAHGVVARILARNLDNDGELVPADRAYLVQLVSQRTNLSPTEAQARV 226

Query: 59  DPM------------QEANPLSGIGTGAGIWVVVSSVISLFVGGWAA 93
           D +            Q A+        A +W+ V+ +I  FVG +AA
Sbjct: 227 DEIYAQARQSVVQAKQAADEARKAAAHATLWMFVALLIGAFVGSFAA 273