Pairwise Alignments

Query, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  370 bits (951), Expect = e-107
 Identities = 228/542 (42%), Positives = 328/542 (60%), Gaps = 6/542 (1%)

Query: 4   INRTSFAKKLMAAFIVCAMITLAVGGLGMLGINRLSDALELTFSNNLVSVANTNETMTAL 63
           + + + A++    F + +++   +G   +  ++ +  +     +N L S+   N+    +
Sbjct: 3   LRKLTIARRAGLGFTLISLLVALLGWFALAQMSTIRQSEVAVETNWLPSMRVVNDIREIM 62

Query: 64  TTHNRGLYRLLDAKDKATAEKMRQSIN---GELERAQKVYAIYRATPLEDDERAAGDQYD 120
                   R+    D A+    R  ++   G+L++   V   +  TP   +E++  DQ+ 
Sbjct: 63  LRIRTISLRMALDTDPASIPTYRGQMDVRLGDLDKKLSVLKTFVDTP---EEKSLTDQFM 119

Query: 121 ALMPAYMSASQNIFDLQQAGKLEDARNRLNALAEGEFNKARGYLQIMIDSNKRQIKEGAE 180
             +  Y SA    F L   G        L    +   + +   L  + D    Q+    +
Sbjct: 120 VTVGQYRSALDRSFALASQGDSVGLNKLLLVDMKQIVDGSGKQLGDLADFYLTQVDAEGK 179

Query: 181 AADRLQSTSVFMLTAGIVIAFVVAIMLGILITRMITRPLRSAIEVAQRIASGDLTQSVSS 240
           +A      S  ++   +VIA +  I L + +TR I  PL+ A+  A+++A+GDLT ++  
Sbjct: 180 SAGAQYDKSRDIVIIFVVIAALCTIGLALWLTRSIVGPLQRAVTAAEQVANGDLTHTIEV 239

Query: 241 TRGDEAGHLLNAIGTMQGNLKRTIQEISSASDQLASAAEELGAVTEESTRGLTRQNDEIQ 300
              DE   LL A+  MQ NL+  ++ I S++ QLASAA EL +VTE+S RGL +QN EI 
Sbjct: 240 DGEDEVTRLLRALAMMQVNLREAMRHIGSSATQLASAATELNSVTEDSYRGLNQQNAEID 299

Query: 301 QAATAVNEMTAAVEEVARNAVSTSEESKSLATDAANGRGQVDNTVKGIGTMVSEITESTG 360
           QAATA+NEMT+AVEEVARNAVSTS+ S   +T A  G+ +V  TV+ I T+   +  ++ 
Sbjct: 300 QAATAINEMTSAVEEVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQTLTDNVQATST 359

Query: 361 SVTTLAGHVRDISKVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHR 420
            V  LA   +DI KVL+VIRSIAEQTNLLALNAAIEAARAGE GRGFAVVADEVRALAHR
Sbjct: 360 LVQNLANQSQDIGKVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAHR 419

Query: 421 TQASTVEIEGMIGTVQSGADGAVAAMSKSLATATNTQELAQRAGSALEKITSGVGMINER 480
           TQ ST+EI+ M+  ++SG+  A+ +M+ S A A +T  LA+ AG +L +ITS +  I+ER
Sbjct: 420 TQQSTLEIDSMVSAMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSINQISER 479

Query: 481 NMVIASASEEQAQVAREVDRNLVNIQELSAQSAAGANQTSASSQELSRLATSFNTMVAQF 540
           N+VIASA+EEQAQV+REVDRN+VNI++LS QS  GANQ SASS ELSRLA   N +V++F
Sbjct: 480 NLVIASAAEEQAQVSREVDRNIVNIRDLSMQSTQGANQISASSHELSRLAADLNQVVSRF 539

Query: 541 KL 542
           K+
Sbjct: 540 KV 541