Pairwise Alignments

Query, 336 a.a., monosaccharide ABC transporter substrate-binding protein, CUT2 family from Pseudomonas syringae pv. syringae B728a

Subject, 311 a.a., monosaccharide ABC transporter substrate-binding protein, CUT2 family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  161 bits (408), Expect = 2e-44
 Identities = 100/306 (32%), Positives = 163/306 (53%), Gaps = 21/306 (6%)

Query: 1   MKFGTSLAAVAAFSLLASSISMAADGKTYKIGAAVYGLKGQFMQNWVRELKEHPAVKDGT 60
           MK   +L ++A   +L S  ++A      KIG ++     QF   W+  L++  + K   
Sbjct: 1   MKTKIALTSLAMALMLGSGAALA----DIKIGVSM----SQFDDTWLTYLRDDMSAKAKV 52

Query: 61  VKIT------VFDGNYDALTQNNQIETMITQHYDAIIFVPIDTKAGVGTVARAMENDIPV 114
           +  T        D   D   Q +Q++ +I +  DA+I  P+DT A       A+   IP+
Sbjct: 53  MSTTEKVDLQFVDARADVNKQLDQVKDLINKKVDALIVNPVDTAATARITKEAVAAGIPL 112

Query: 115 IASNTRVAGNKVPY----VGNDDVEGGRLQAQAMVDKLKGKGNVVIIQGPIGQSAQIDRE 170
           +  N R     +P     V +DDVE GRLQAQ + DK+K KG+V+I+ G +  ++  +R 
Sbjct: 113 VYVNRRPDDLNLPAGVATVTSDDVEAGRLQAQYIADKMKDKGDVMILLGDLANNSTQNRT 172

Query: 171 KGELEVLSKHPDIKIIEKKTANWSRAEAQTLTEDWLNAHQNGGISGIISQNDDMALGALQ 230
           KG  EVL K+PDIKI E++T  + R +   LT DWL   Q    + +++ ND+MA+GA  
Sbjct: 173 KGVKEVLDKYPDIKIEEEQTGTYLRQKGMDLTNDWLT--QGRKFNAVLANNDEMAIGAAM 230

Query: 231 AVKSRNLKPADVPITSIDGMPDAIQAAKKNEI-TTFLQDAQAQSQGALDVALRTLAGKDY 289
           A+K   ++   + I  +DG PD + A  K ++  +  QDA+ Q+ GA+D A++    +  
Sbjct: 231 ALKQAGVEKGSILIAGVDGTPDGLNAVTKGDLAVSVYQDAKGQADGAIDAAVKLARKEKI 290

Query: 290 KPQSVI 295
           +PQ++I
Sbjct: 291 EPQAII 296