Pairwise Alignments

Query, 336 a.a., monosaccharide ABC transporter substrate-binding protein, CUT2 family from Pseudomonas syringae pv. syringae B728a

Subject, 318 a.a., ABC transporter periplasmic-binding protein YtfQ from Escherichia fergusonii Becca

 Score =  109 bits (272), Expect = 1e-28
 Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 12/257 (4%)

Query: 7   LAAVAAFSLLASSISMAADGKTYKIGAAVYGLKGQFMQNWVRELKEHPAVKDGTVKITVF 66
           L  V+A S   SS+++AA      +G +  G +  +        K     +  T+KI   
Sbjct: 5   LLVVSAVSAAMSSMALAAP---LTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIA-- 59

Query: 67  DGNYDALTQNNQIETMITQHYDAIIFVPIDTKAGVGTVARAMENDIPVIASNTRV-AGNK 125
           DG      Q   + + + Q  DAI   P+        +  A + +IPV   +  +   +K
Sbjct: 60  DGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDK 119

Query: 126 VPY---VGNDDVEGGRLQAQAMVDKLKGKG-NVVIIQGPIGQSAQIDREKGELEVLSKHP 181
             Y   V  D++  G+L    +V ++ GK  NVV +QG +G S  IDR+KG  E +   P
Sbjct: 120 SLYMTTVTADNILEGKLSGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAP 179

Query: 182 DIKIIEKKTANWSRAEAQTLTEDWLNAHQNG-GISGIISQNDDMALGALQAVKSRNLKPA 240
           +IKII  ++ +++R++ + + E ++ A  NG  I  + + NDDM +GA+QA+K   LKP 
Sbjct: 180 NIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPG 239

Query: 241 -DVPITSIDGMPDAIQA 256
            D+   SIDG+PD  +A
Sbjct: 240 KDILTGSIDGVPDIYKA 256