Pairwise Alignments

Query, 797 a.a., UvrD/REP helicase from Pseudomonas syringae pv. syringae B728a

Subject, 684 a.a., DNA helicase IV from Escherichia coli ECRC101

 Score = 74.3 bits (181), Expect = 2e-17
 Identities = 77/286 (26%), Positives = 125/286 (43%), Gaps = 30/286 (10%)

Query: 501 LRPLAHLMIDEFQDVSPQIVSWLRASLREIRRRGPALHTGRIAQHSSLLCVGDDWQSIYG 560
           + P  H+++DEFQD+SPQ  + L A    +R++            ++L  VGDDWQ+IY 
Sbjct: 428 ISPWKHILVDEFQDISPQRAALLAA----LRKQN---------SQTTLFAVGDDWQAIYR 474

Query: 561 WRGSSPKYFMEFAKEFSSPATTRVMLSDNFRSHQHIIDAAEHIVRAAPAIPGKKARASGL 620
           + G+       F + F      R  L   +R +  I + A   ++  P    KK   S  
Sbjct: 475 FSGAQMSLTTAFHENFGE--GERCDLDTTYRFNSRIGEVANRFIQQNPG-QLKKPLNSLT 531

Query: 621 LQELLPVKVLDRDE-DELAERVAEHYHDGDSILLLYRKGSEKARFSARLQALIDADSANG 679
             +   V +LD  + D L ++++ +    + IL+L       AR+     A ++  +A  
Sbjct: 532 NGDKKAVTLLDESQLDALLDKLSGYAKPEERILIL-------ARYHHMRPASLE-KAATR 583

Query: 680 AQNRRIRTLTYHSSKGLQADAVFLLGDCQHLTVSPYKNQVYRLAGLGDTNDLQPFDTAQK 739
               +I  +T H+SKG QAD V ++G  +     P   +      + +   L P +    
Sbjct: 584 WPKLQIDFMTIHASKGQQADYVLIVGLQEGSDGFPAAAR----ESIMEEALLPPVEDFPD 639

Query: 740 DEVLRLAYVAITRSARHCYWYIDESATSGDAVQMPKASDRIARDKP 785
            E  RL YVA+TR ARH  W +         V++ K  D     KP
Sbjct: 640 AEERRLMYVALTR-ARHRVWALFNKENPSPFVEILKNLDVPVARKP 684



 Score = 26.9 bits (58), Expect = 0.004
 Identities = 13/30 (43%), Positives = 20/30 (66%)

Query: 103 AQWKMIFSDTPSTYVIAGAGAGKSTSLVLR 132
           AQ + + +   S  V+AGAG+GK++ LV R
Sbjct: 200 AQARAVVNGEHSLLVLAGAGSGKTSVLVAR 229