Pairwise Alignments

Query, 797 a.a., UvrD/REP helicase from Pseudomonas syringae pv. syringae B728a

Subject, 685 a.a., DNA helicase IV from Dickeya dianthicola ME23

 Score = 73.6 bits (179), Expect = 4e-17
 Identities = 88/334 (26%), Positives = 134/334 (40%), Gaps = 56/334 (16%)

Query: 440 SEMSFASDDPDRFFFEALSLFWKAFETHLLAQSPPIMTYNRMFALFGETSPENLKHVSDP 499
           SEM   +DD  R            F+  L   +P +  + +     G      L H +  
Sbjct: 371 SEMLALADDETR----------PLFQQRLRLMAPLLKAWKKALKDEGAVDFSGLIHQAVN 420

Query: 500 ML------RPLAHLMIDEFQDVSPQIVSWLRASLREIRRRGPALHTGRIAQHSSLLCVGD 553
            L       P  H+++DEFQD+SPQ    L A  R+I               SSL  VGD
Sbjct: 421 FLDKGRFVSPWRHILVDEFQDISPQRARLLDALRRQI-------------PDSSLFAVGD 467

Query: 554 DWQSIYGWRGSSPKYFMEFAKEFSSPATTRVMLSDNFRSHQHIIDAAEHIVRAAPAIPGK 613
           DWQ+IY + G+       F + F   A  + +L   +R +  I D A   ++  PA   K
Sbjct: 468 DWQAIYRFSGAELTLTTTFERHFGEGA--QCVLDTIYRFNHRIGDIASRFIQQNPAQLKK 525

Query: 614 KARASGLLQELLPVKVLDRDEDELAERVAEHYHDGDSILLLYRKGSEKARFSARLQALID 673
              +     +   V +     + L ++++ +      IL+L R               + 
Sbjct: 526 ALNSLRDGNKKSVVLLAQEQLEALLDKMSGYVTTQARILVLARYHH------------LR 573

Query: 674 ADSANGAQNR----RIRTLTYHSSKGLQADAVFLLG--DCQHLTVSPYKNQVYRLAGLGD 727
            D+   AQ R     +  +T H+SKG QAD V +LG  + +    +P +  V     L  
Sbjct: 574 PDALEKAQTRWPHLHLDFMTIHASKGQQADYVIVLGLHEGRDGFPAPPRESVLEAVLLPQ 633

Query: 728 TNDLQPFDTAQKDEVLRLAYVAITRSARHCYWYI 761
               +PF  A   E  RL YVA+TR A+H  W +
Sbjct: 634 P---EPFPDA---EERRLLYVALTR-AKHQVWLL 660



 Score = 32.0 bits (71), Expect = 1e-04
 Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 11/95 (11%)

Query: 103 AQWKMIFSDTPSTYVIAGAGAGKSTSLVLRILLLHHYLGFELNAMTVVTFTRESRKDFIS 162
           +Q + + +   +  V+AGAG+GK++ LV R   L H        + ++ F R++  +  S
Sbjct: 200 SQCQAVVNGENAVLVLAGAGSGKTSVLVARAAWLLHRAEASAQQILLLAFGRQAADEMNS 259

Query: 163 KLIDVMALWGHALEQKQAREV-VRTFHSRILPLVR 196
           ++           E+    EV  +TFH+  L +++
Sbjct: 260 RI----------RERLHTDEVQAKTFHALALHIIQ 284