Pairwise Alignments

Query, 487 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

Subject, 490 a.a., Outer membrane protein OprM from Pseudomonas sp. DMC3

 Score =  720 bits (1858), Expect = 0.0
 Identities = 370/482 (76%), Positives = 418/482 (86%), Gaps = 2/482 (0%)

Query: 1   MTERLAFTSRPTGLIRPFALGLCVVLLSACAVGPDYQKPSMAAPAQFKAAQGWRTATPSD 60
           MT+R           R  +L LCV LLSACAVGPDYQ+P  A  AQFK A+GWR A PSD
Sbjct: 1   MTDRSLLQLATVRGSRLLSLSLCVALLSACAVGPDYQRPQTAEIAQFKEAEGWRQANPSD 60

Query: 61  GMGKGAWWEVYKDPQLNALVERLNTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTG 120
            + +GAWWE+Y D QLNAL+E+LN+SNQTVAQ +AQ+RQAQ LVRS+R AF P++DL+ G
Sbjct: 61  SLARGAWWELYGDQQLNALIEKLNSSNQTVAQSEAQFRQAQALVRSARGAFYPSVDLSLG 120

Query: 121 KTRSGQGTGTSNSG--TSASGIRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADL 178
           KTRS QGTG+S+S   +S+SGIR++YNAQLGVSWEADVWGKLRRGLEAD ANAQAS ADL
Sbjct: 121 KTRSSQGTGSSSSSLSSSSSGIRDTYNAQLGVSWEADVWGKLRRGLEADEANAQASFADL 180

Query: 179 AAMRLSLQSELVQNYLQLRVIDEQKRLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQ 238
           AAMRLS QSELVQNYLQLRVID+QKRLLE+TV AY+RSL +TQNQYRAG+SG DAVAQAQ
Sbjct: 181 AAMRLSQQSELVQNYLQLRVIDQQKRLLEATVAAYERSLKMTQNQYRAGVSGRDAVAQAQ 240

Query: 239 TQLKSTQADLIDLAWQRAQFENAIAVLMGMAPADFNLPASTSIPQLPQIPPGLPSQLLER 298
           TQLKSTQADL+DL WQRAQFENAIAVL G APA+F++  S SIP LPQ+P  LPSQLLER
Sbjct: 241 TQLKSTQADLVDLIWQRAQFENAIAVLTGEAPANFSIAESQSIPNLPQVPLSLPSQLLER 300

Query: 299 RPDIAAAERSVMGANANIGVARAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLA 358
           RPDIA+AERSV+ ANANIGVA+AAYYPD TLS+SGGYSSS+  N ISLPNRFWSVGPQL+
Sbjct: 301 RPDIASAERSVIAANANIGVAKAAYYPDLTLSLSGGYSSSSSKNLISLPNRFWSVGPQLS 360

Query: 359 LTLFDGGRRSAEVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALV 418
           L LFDGG RSAEVDR+EA YD+TVA+YRQTVL+GF+EVENYLVQLKVYE EAAVRQEAL 
Sbjct: 361 LPLFDGGIRSAEVDRSEAAYDETVARYRQTVLDGFREVENYLVQLKVYEDEAAVRQEALD 420

Query: 419 SARDSLRLTNNQYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIASVQLIAALGGGWD 478
           +ARDSLRLT NQYKAGLI Y+DVV VQATALSNERSVL++LQSRLIASVQLIAALGGGWD
Sbjct: 421 AARDSLRLTENQYKAGLIAYIDVVVVQATALSNERSVLNILQSRLIASVQLIAALGGGWD 480

Query: 479 AE 480
            +
Sbjct: 481 GQ 482