Pairwise Alignments

Query, 487 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

Subject, 497 a.a., efflux transporter outer membrane subunit from Paraburkholderia sabiae LMG 24235

 Score =  348 bits (892), Expect = e-100
 Identities = 200/479 (41%), Positives = 277/479 (57%), Gaps = 14/479 (2%)

Query: 14  LIRPFALGLCVVLLSACAVGPDYQKPSMAAPAQFK------AAQGWRTATPSDGMGKGA- 66
           L R         L + CAVGPDY++P +A PA FK      A+  W+ A P       + 
Sbjct: 12  LHRTIVAAAIAALCAGCAVGPDYKRPDVAVPATFKEMNSPDASGLWQQAQPDPAASLDSR 71

Query: 67  WWEVYKDPQLNALVERLNTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTGKTRSGQ 126
           WW ++ D  L+AL ER   +NQT+AQYDA YR A+  V S+RA+  PT+      TRSG 
Sbjct: 72  WWTMFNDDTLSALCERALKANQTLAQYDAAYRAARAQVASARASLFPTVSFAGSGTRSGS 131

Query: 127 GTGT--SNSGTSASGIRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLS 184
           G+ T  S+SG+ +S    S +AQL  SWE D+WG +RR +EA  A+AQAS A LA  RLS
Sbjct: 132 GSTTQVSSSGSVSSYASKSVSAQLEASWEPDLWGSVRRSVEASEASAQASDAQLAGERLS 191

Query: 185 LQSELVQNYLQLRVIDEQKRLL--ESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLK 242
           + + L  +Y  +R  D    LL  E  +DA    L LT+ +Y+ G+S  D V  A   L+
Sbjct: 192 VLATLAVDYFTVRAADADLTLLAEEHRIDA--ELLALTEAKYKQGVSSYDDVRTAHNTLQ 249

Query: 243 STQADLIDLAWQRAQFENAIAVLMGMAPADFNLPASTSIP-QLPQIPPGLPSQLLERRPD 301
           +    +      R Q+E+AIAVL+G APA F+LP        LP +P  LPS LL+RRPD
Sbjct: 250 TIDESIATAQLTRRQYEHAIAVLVGEAPAAFSLPVLADYRFDLPTLPAALPSTLLQRRPD 309

Query: 302 IAAAERSVMGANANIGVARAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTL 361
           +  AER+V   NA IGVA+A Y+P  TLS  GG+S ++ A+ +SLP RFWS+G  +A T+
Sbjct: 310 VVQAERTVAQYNAKIGVAKAGYFPTLTLSADGGWSGTSLAHLVSLPTRFWSLGLDVAQTV 369

Query: 362 FDGGRRSAEVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSAR 421
           FD G  SA V   +A YDQ VA YRQTVL+ FQ+VE+YL  +++  ++AA   E    + 
Sbjct: 370 FDAGATSASVRNAKANYDQEVAAYRQTVLSAFQDVEDYLSAVQITSRQAAASDEVAQRSG 429

Query: 422 DSLRLTNNQYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIASVQLIAALGGGWDAE 480
           +        + AG    +D+++ Q T + + +  L    + L  SV L+ ALGGGWD +
Sbjct: 430 ELAASQQRNFAAGTSSRIDMLDTQLTQVQDRKIALDYSSTALQNSVMLVKALGGGWDGK 488