Pairwise Alignments

Query, 1035 a.a., Acriflavin resistance protein from Pseudomonas syringae pv. syringae B728a

Subject, 1026 a.a., multidrug efflux RND transporter permease subunit MdtC from Serratia liquefaciens MT49

 Score = 1103 bits (2854), Expect = 0.0
 Identities = 577/1028 (56%), Positives = 755/1028 (73%), Gaps = 6/1028 (0%)

Query: 1    MNLSAPFIRRPVATVLLSLAIMLLGAVSFRLLPVAPLPNMDFPVIVVSASLAGASPEVMA 60
            M   A FI RPVAT LL+LAI + G + F LLPV+PLP +D+PVI +SASL GA PE MA
Sbjct: 1    MKFFALFIYRPVATTLLTLAIAISGVIGFSLLPVSPLPQVDYPVISISASLPGADPETMA 60

Query: 61   STVATPLERSLGSIAGVNTMTSNSSQGTTRIILQFDLDRDINGAAREVQAAINASRNLLP 120
            S+VATPLER+LG IAGVN MTS SS G+TR+ILQFDLDRDINGAAR+VQAAINA+++LLP
Sbjct: 61   SSVATPLERALGRIAGVNEMTSMSSLGSTRVILQFDLDRDINGAARDVQAAINAAQSLLP 120

Query: 121  SGMRSMPTYKKVNPSQAPIMVLSMTSTVLEKGQLYDLASTILSQSLSQVSGVGEVQIGGS 180
            +GM S P+Y+KVNPS APIM+L++TS    +GQLYD AST L+Q ++Q  GVG+V +GGS
Sbjct: 121  TGMPSRPSYRKVNPSDAPIMILTLTSDTYSQGQLYDFASTQLAQKIAQTEGVGDVSVGGS 180

Query: 181  SLPAVRIELEPQMLSQYGVSLDDVRTAITGANVRRPKGFVEDDQHNWQVQANDQLETAKD 240
            SLPAVR+EL P  L   G+SLD VR  I+ ANVRRP+G V++ Q  WQ+QAND+L+TA+ 
Sbjct: 181  SLPAVRVELNPSALFNQGISLDAVRQTISDANVRRPQGSVDNQQQRWQIQANDELKTAEA 240

Query: 241  YSPLIIRYKDGATLRLKDVAKVSDAVEDRYNSGFYNNDRAVLLVVNRQAGANIIETVAQI 300
            Y PLII Y +GA +RL DVA++ D+V+D  N+G  N   A++L ++R   ANIIETV +I
Sbjct: 241  YRPLIIHYNNGAAVRLSDVAEIKDSVQDVRNAGMTNAKPAIILAISRAPDANIIETVDRI 300

Query: 301  KAQLPALRAVLPASVSLNIAMDRSPVIKATLHEAEMTLLIAVVLVVMVVFLFLGSFRASL 360
            +A+LPAL+  +PAS+ LNIA DRSP I+A+L E E +L+IA+ LV++VVF+FL S RA+L
Sbjct: 301  RAELPALQDNIPASIQLNIAQDRSPTIRASLAEVEQSLVIAIGLVILVVFIFLRSGRATL 360

Query: 361  IPTLAVPVSLVGTFAIMHLFGFSLNNLSLMALILATGLVVDDAIVVLENISRHIHNGLDP 420
            IP +AVPVSL+G+FA M+L GFSLNNLSLMAL +ATG VVDDAIVVLENISRH+  G+ P
Sbjct: 361  IPAVAVPVSLIGSFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENISRHVEAGMKP 420

Query: 421  MKAAFLGAKEVGFTLLSMNVSLVAVFISILFMGGLVESLFREFSITLSVSIIVSLIVSLT 480
            + AA  G +EVGFT+LSM+VSLVAVFI +L M GL   LFREF++TLSVSI +SLI+SLT
Sbjct: 421  LNAALQGVREVGFTVLSMSVSLVAVFIPLLLMEGLPGRLFREFAVTLSVSIGLSLIISLT 480

Query: 481  LTPMLCARWLKPREAHGENAFQRWSERVNDRMVAGYDRSLGWVMRHRRLTLLSLLITVVV 540
            LTPM+CA  L+ +    +   + + + +   +  GY RSL WV+ H R  L   L T+ +
Sbjct: 481  LTPMMCAYLLRHQPPRAQRRIRGFGKMLL-ALQKGYGRSLSWVLGHSRWVLALFLATIAL 539

Query: 541  NIALYVVVPKTFLPQQDTGQLMGFVRGDDGLSFSVMQPKMETFRLSILADPAVESVAGFI 600
            N+ LY+ +PKTF P+QDTG+LMGF++ D  +SF  M+ K+E F   +  DP VE+V GF 
Sbjct: 540  NVWLYISIPKTFFPEQDTGRLMGFIQADQSISFQAMRVKLEDFMKIVREDPDVENVTGFT 599

Query: 601  GGSGGTNNAFMIVRLKPIAERKLSAEKVVERLRKNMPHVPGGRLFLAPDQDLQLGGGREQ 660
            GGS  TN+  M + LKP++ R   A+KV+ RLR  +   PG  LFL   QD+++GG   Q
Sbjct: 600  GGS-RTNSGSMFISLKPLSVRSDDAQKVIARLRARLAKEPGASLFLMAVQDIRVGG--RQ 656

Query: 661  TSSQYQYIVQSADLGSLRLWYPKIVAALKSIPELTAIDAREGRGAQQVTLVVNRDTAKRL 720
             ++ YQY + + DL +LR W PKI  AL ++PEL  +++ +     ++ LV +R+T  RL
Sbjct: 657  ANASYQYTLLADDLAALREWEPKIRIALAALPELADVNSDQQDKGSEMDLVYDRETMARL 716

Query: 721  GIDMNMVTAVLNNAYSQRQVSTIYDSLNQYKVVMEVNPKYAQDPVTLEQVQVITADGQRV 780
            GI ++    +LNNA+ QRQ+STIY  LNQYKVVMEV P Y QD  +L+++ VI  DG+ +
Sbjct: 717  GISVSDANNLLNNAFGQRQISTIYQPLNQYKVVMEVAPPYTQDVSSLDKMFVINKDGKAI 776

Query: 781  PLSSIAHYERSLANDRVSHDGQFAAENISFDLAEGASLDKATVAIERAIAAIGLPSDIIS 840
            PLS  A +  + A   V+H G  AA  ISF+L +G SL  AT A+ER + A+G+PS +  
Sbjct: 777  PLSYFASWRPANAPLSVNHQGLSAASTISFNLPDGGSLSDATSAVERTMTALGVPSTVRG 836

Query: 841  KMAGTANAFASTQKSQPWMILGALLAVYLVLGILYESYIHPLTILSTLPSAGVGALLTIY 900
              AGTA  F  T KSQ  +I  A+  VY+VLGILYESYIHPLTILSTLPSAGVGALL + 
Sbjct: 837  AFAGTAQVFQETLKSQLLLIAAAIATVYIVLGILYESYIHPLTILSTLPSAGVGALLALE 896

Query: 901  VLGSEFSLISLLGLFLLIGVVKKNAIMMIDLALHLEREQGMTPQESIRSACLQRLRPILM 960
            + G+ FSLI+L+G+ LLIG+VKKNAIMM+D AL  +R  G+   ++I  ACL R RPI+M
Sbjct: 897  LFGAPFSLIALIGIMLLIGIVKKNAIMMVDFALDAQRNGGINAHDAIFQACLLRFRPIMM 956

Query: 961  TTMAAILGALPLLLSTAEGAEMRKPLGLTIIGGLIFSQVLTLYTTPVVYLYLDRLRHRYN 1020
            TT+AA+ GALPL+L+  +GAE+R+PLG+TI GGLI SQ+LTLYTTPVVYLY DRL+ ++ 
Sbjct: 957  TTLAALFGALPLVLTHGDGAELRQPLGITIAGGLIVSQLLTLYTTPVVYLYFDRLQMKFR 1016

Query: 1021 KWRGVRTD 1028
              RG + D
Sbjct: 1017 --RGKKLD 1022